RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 OR4C45A6NMZ5 311 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 H0YC42 278 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CYR61O00622 381 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PEX12O00623 359 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CLDN4O14493 209 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PPM1DO15297 605 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 UPK3AO75631 287 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SCO1O75880 301 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 STK17BO94768 372 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ATG12O94817 140 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 RAB3DO95716 219 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ABHD16AO95870 558 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CSTAP01040 98 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 APOC3P02656 99 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 HEXAP06865 529 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OR4E1P0C645 316 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PRKACAP17612 351 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ANXA7P20073 488 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CD34P28906 385 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PEBP1P30086 187 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 DCTDP32321 178 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 NAA10P41227 235 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CX3CR1P49238 355 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PPM1FP49593 454 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 H2BFSP57053 126 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SNTB1Q13884 538 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 RUNX2Q13950 521 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ARL6IP1Q15041 203 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 TOMM34Q15785 309 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ETFDHQ16134 617 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF74Q16587 644 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 MICBQ29980 383 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 DEFB134Q4QY38 66 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 TRMT12Q53H54 448 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ALG10Q5BKT4 473 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 RNASE12Q5GAN4 147 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 EEF1A1P5Q5VTE0 462 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 LIPNQ5VXI9 398 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 NKAIN2Q5VXU1 208 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SLC18B1Q6NT16 456 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 C11orf87Q6NUJ2 197 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 LEG1Q6P5S2 330 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 DNM1P34Q6PK57 102 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 DEGS2Q6QHC5 323 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 FIGLAQ6QHK4 219 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ALKAL2Q6UX46 152 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 DRAM2Q6UX65 266 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF704Q6ZNC4 412 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CFAP77Q6ZQR2 320 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OLIG3Q7RTU3 272 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 HMGN2P46Q86SG4 172 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 FAM90A1Q86YD7 464 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 LINC00518Q8N0U6 118 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 GABRG1Q8N1C3 465 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 MUC20Q8N307 709 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OR13C5Q8NGS8 318 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OR2G2Q8NGZ5 317 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OR6S1Q8NH40 331 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 OR10G6Q8NH81 332 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 ARL11Q969Q4 196 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 MARC2Q969Z3 335 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM106AQ96A25 262 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 FAM3DQ96BQ1 224 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 MRPS24Q96EL2 167 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SAT2Q96F10 170 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 C4orf45Q96LM5 186 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 INTS14Q96SY0 518 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PHB2Q99623 299 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 GFI1Q99684 422 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 PDCD1LG2Q9BQ51 273 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 TCEAL7Q9BRU2 100 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 C1orf43Q9BWL3 253 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 XKR8Q9H6D3 395 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 HPF1Q9NWY4 346 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 FLRT3Q9NZU0 649 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 JKAMPQ9P055 326 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 GRHPRQ9UBQ7 328 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 KLK11Q9UBX7 282 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SHPKQ9UHJ6 478 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 KCNE5Q9UJ90 142 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 FLVCR2Q9UPI3 526 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 KCNK6Q9Y257 313 aa5.24□□□□□ -1.57
VPS33B-203ENST00000554264 CARHSP1Q9Y2V2 147 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SPTBN1Q01082 2364 aaKnown RBP5.24□□□□□ -1.57
VPS33B-203ENST00000554264 SCN3AQ9NY46 2000 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TRBV6-7A0A0A0MS04 114 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 KIR2DS5A0A0G2JLQ3 304 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 A0A0G2JNG1 304 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR6C68A6NDL8 312 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR5H14A6NHG9 310 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NPIPB13A6NJU9 1138 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF736B4DX44 427 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NPIPB4C9JG80 1138 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 E9PLN8 166 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 K7EM74 188 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 KIR2DS3K7RE56 304 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 XKRYO14609 159 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TAAR5O14804 337 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms