RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 EFCAB11Q9BUY7 163 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 CNTD2Q9H8S5 307 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 WFDC1Q9HC57 220 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 ZNF581Q9P0T4 197 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 HSF4Q9ULV5 492 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 CYP8B1Q9UNU6 501 aa8.51□□□□□ -1.05
SIX4-202ENST00000554079 PCNTO95613 3336 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 TRAV27A0A087WT01 109 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 A0A1B0GU03 582 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 MED19A0JLT2 244 aaPredicted RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 C1QTNF3-AMACRE9PGA6 284 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 PLPP1O14494 284 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 AQP7O14520 342 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 UPK3AO75631 287 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 KNG1P01042 644 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 CEACAM1P13688 526 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 THPOP40225 353 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 ZNF136P52737 540 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 LASP1Q14847 261 aaKnown RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 SLC9A3R2Q15599 337 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 FAM78AQ5JUQ0 283 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 SP5Q6BEB4 398 aaPredicted RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 ZNF550Q7Z398 422 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 TMEM156Q8N614 296 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 TTC9BQ8N6N2 239 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 STPG4Q8N801 248 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 MARCH1Q8TCQ1 289 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 ZNF764Q96H86 408 aaPredicted RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 PGAM5Q96HS1 289 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 ADAD1Q96M93 576 aaKnown RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 TBX15Q96SF7 602 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 RNF2Q99496 336 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 PYGO2Q9BRQ0 406 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 GLIPR2Q9H4G4 154 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 KIR3DX1Q9H7L2 352 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 FRRS1LQ9P0K9 344 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 APOBEC3BQ9UH17 382 aaKnown RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 SERTAD3Q9UJW9 196 aa8.5□□□□□ -1.05
SIX4-202ENST00000554079 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 ZFP37Q9Y6Q3 630 aaPredicted RBP8.5□□□□□ -1.05
SIX4-202ENST00000554079 WIPF3A6NGB9 483 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 J3QW42 95 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 YPEL1O60688 119 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 CNMDO75829 334 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FBXO45P0C2W1 286 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 NBEAP1P0C6P0 100 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 APOBEC3AP31941 199 aaPredicted RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 HLA-DRB3P79483 266 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FOXK1P85037 733 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 ZFP36L1Q07352 338 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 DUSP8Q13202 625 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 PCK2Q16822 640 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TMEM128Q5BJH2 165 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 RTL6Q6ICC9 239 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 CLEC18BQ6UXF7 455 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FBXW12Q6X9E4 464 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 ADIPOR2Q86V24 386 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 NPEPL1Q8NDH3 523 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OR8G5Q8NG78 346 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OR56B2PQ8NGI1 322 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OR5L2Q8NGL0 311 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 ADAMTS18Q8TE60 1221 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TMEM170AQ8WVE7 144 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TMEM239Q8WW34 195 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TMEM40Q8WWA1 233 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 WFDC12Q8WWY7 111 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 MCHR2Q969V1 340 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TECTBQ96PL2 329 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 YPEL2Q96QA6 119 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 PAAF1Q9BRP4 392 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 C16orf70Q9BSU1 422 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 SH3BGRL3Q9H299 93 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 RBKSQ9H477 322 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 KLHL28Q9NXS3 571 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 MARCH2Q9P0N8 246 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 YIPF1Q9Y548 306 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 SMPD2O60906 423 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 KAT7O95251 611 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 ABHD16AO95870 558 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 IFNA21P01568 189 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 PRH1P02810 166 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OPN1MWP04001 364 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 HSPB1P04792 205 aaKnown RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 RHOCP08134 193 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OPN1MW2P0DN77 364 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 OPN1MW3P0DN78 364 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TMEM225BP0DP42 221 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 CTHP32929 405 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 P2RY1P47900 373 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 TBPL1P62380 186 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 FHL1Q13642 323 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 SLC22A6Q4U2R8 563 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 GLB1LQ6UWU2 654 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 H1FOOQ8IZA3 346 aaPredicted RBP8.49□□□□□ -1.05
SIX4-202ENST00000554079 LINC01555Q8NAE3 123 aa8.49□□□□□ -1.05
SIX4-202ENST00000554079 ZNF740Q8NDX6 193 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms