RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PPP1CBP62140 327 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SLC35A1P78382 337 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 CXCL6P80162 114 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 MRPS25P82663 173 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 REEP5Q00765 189 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 KDSRQ06136 332 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 CKAP4Q07065 602 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 SMARCB1Q12824 385 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 FZD2Q14332 565 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 KIAA0087Q14695 138 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 ZBTB6Q15916 424 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 RFX4Q33E94 735 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 DNAL1Q4LDG9 190 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PAGE3Q5JUK9 113 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 TMEM31Q5JXX7 168 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 THEM4Q5T1C6 240 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SDHAF4Q5VUM1 108 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 EPGNQ6UW88 154 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 USP50Q70EL3 339 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 PRSS41Q7RTY9 318 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PEX26Q7Z412 305 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 TMEM251Q8N6I4 163 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 METTL13Q8N6R0 699 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 OR1N2Q8NGR9 330 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 OR2Y1Q8NGV0 311 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 MCOLN3Q8TDD5 553 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 RXFP2Q8WXD0 754 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 TMEM159Q96B96 161 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SMIM10Q96HG1 83 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PPP1R36Q96LQ0 422 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 UBE2E2Q96LR5 201 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PDCD1LG2Q9BQ51 273 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 C20orf144Q9BQM9 153 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 RIOK2Q9BVS4 552 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 NUDT9Q9BW91 350 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SLIRPQ9GZT3 109 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 NXF2Q9GZY0 626 aaKnown RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 COA1Q9GZY4 146 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PORCNQ9H237 461 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 ARV1Q9H2C2 271 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 OR51V1Q9H2C8 321 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 Q9H3A6 140 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 UGT1A7Q9HAW7 530 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 UGT1A8Q9HAW9 530 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 SLC40A1Q9NP59 571 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 MYOZ1Q9NP98 299 aaPredicted RBP1.68□□□□□ -2.14
SRP54-204ENST00000553923 TMEM100Q9NV29 134 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 FGFR1OP2Q9NVK5 253 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 PLEKHJ1Q9NW61 149 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 CD274Q9NZQ7 290 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 GON4LQ3T8J9 2241 aa1.68□□□□□ -2.14
SRP54-204ENST00000553923 TRAV8-4A0A0B4J246 113 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 A6NDN8 102 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR6C70A6NIJ9 312 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 FAM220BPB1ANY3 271 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 C9J4A7 227 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 H0Y980 276 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 H3BNH8 94 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 H7C417 338 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 M0QZ92 97 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 FABP7O15540 132 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 GATCO43716 136 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 SHOX2O60902 331 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 LYPLA1O75608 230 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 AQP8O94778 261 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 GLSO94925 669 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR5F1O95221 314 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TTC4O95801 387 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PTHP01270 115 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 P01737 135 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 APOEP02649 317 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ORM1P02763 201 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TACSTD2P09758 323 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR5AL1P0C617 328 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 LIMS3P0CW19 117 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 LIMS4P0CW20 117 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 COX5BP10606 129 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 MLNP12872 115 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ZNF7P17097 686 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 WARSP23381 471 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 MYL9P24844 172 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PSMB5P28074 263 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PFN2P35080 140 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RPA3P35244 121 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 CEACAM6P40199 344 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RPL34P49207 117 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 RPL14P50914 215 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 NDUFA8P51970 172 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 VBP1P61758 197 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RPS23P62266 143 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 NDPQ00604 133 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 C2orf54Q08AI8 447 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 QPRTQ15274 297 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 NSDHLQ15738 373 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 BCL2A1Q16548 175 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 GSG1Q2KHT4 349 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RGS21Q2M5E4 152 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TIMM50Q3ZCQ8 353 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 COX19Q49B96 90 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PRR30Q53SZ7 412 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms