RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CD79BP40259 229 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 VHLP40337 213 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ACTR1BP42025 376 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ERFP50548 548 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CCNG1P51959 295 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 NKX2-5P52952 324 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM33P57088 247 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CXCR4P61073 352 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ERVS71-1P61550 626 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RPL23AP62750 156 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 ARG2P78540 354 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 IRF8Q02556 426 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RELAQ04206 551 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SIGLEC14Q08ET2 396 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CDH17Q12864 832 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 STX5Q13190 355 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ERCC8Q13216 396 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SLAMF1Q13291 335 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RCAN2Q14206 197 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PDK3Q15120 406 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ANGPT1Q15389 498 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TSC22D1Q15714 1073 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ZBTB6Q15916 424 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 C5orf64Q2M2E5 130 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ALKBH6Q3KRA9 238 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 DMRTC1Q5HYR2 192 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 HES5Q5TA89 166 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 OR4F3Q6IEY1 312 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM220Q6QAJ8 160 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 DUX4L9Q6RFH8 374 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 C5orf46Q6UWT4 87 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CD300LGQ6UXG3 332 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 Q6ZPB1 254 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM179Q6ZVK1 233 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SLC35D2Q76EJ3 337 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 WDR86Q86TI4 376 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 LHFPL3Q86UP9 236 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CYP4Z1Q86W10 505 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TRIM69Q86WT6 500 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ECHDC2Q86YB7 292 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PLCZ1Q86YW0 608 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PRSS58Q8IYP2 241 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PDIK1LQ8N165 341 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 FAM58AQ8N1B3 248 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 STPG2Q8N412 459 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TRAM1L1Q8N609 369 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 C12orf29Q8N999 325 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CYB561A3Q8NBI2 242 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM104Q8NE00 496 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 FAM83FQ8NEG4 500 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 OR2L3Q8NG85 312 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 OR5D18Q8NGL1 313 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 OR4A15Q8NGL6 344 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 OR4S2Q8NH73 311 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 GPX8Q8TED1 209 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PYDC1Q8WXC3 89 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ESR2Q92731 530 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PDXPQ96GD0 296 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 C9orf72Q96LT7 481 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 OLFM3Q96PB7 478 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SORT1Q99523 831 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SEC22CQ9BRL7 303 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 GABARAPL3Q9BY60 117 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ANKRD60Q9BZ19 345 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 PKIBQ9C010 78 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 YIPF3Q9GZM5 350 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RAB1BQ9H0U4 201 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ALX4Q9H161 411 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 TMEM185BQ9H7F4 350 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 GEMIN7Q9H840 131 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 UGT1A7Q9HAW7 530 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 UGT1A10Q9HAW8 530 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 UGT1A8Q9HAW9 530 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ASCL3Q9NQ33 180 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 SAMSN1Q9NSI8 373 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 C20orf96Q9NUD7 363 aaPredicted RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 PARVAQ9NVD7 372 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 FAIMQ9NVQ4 179 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 CMTM6Q9NX76 183 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 NKIRAS1Q9NYS0 192 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 ADAM28Q9UKQ2 775 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TBC1D24Q9ULP9 559 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 KCNIP3Q9Y2W7 256 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 RBMX2Q9Y388 322 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 PPRC1Q5VV67 1664 aaKnown RBP1.63□□□□□ -2.15
VRK1-202ENST00000553683 UBN2Q6ZU65 1347 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 TEX14Q8IWB6 1497 aa1.63□□□□□ -2.15
VRK1-202ENST00000553683 MSH6P52701 1360 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 IGKV1D-13A0A0B4J2D9 117 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 ARHGEF35A5YM69 484 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 METTL21EPA6NDL7 271 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 FABP12A6NFH5 140 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 PDZK1P1A8MUH7 402 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 C2orf74A8MZ97 194 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 E5RI56 91 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 LRRN3E7EW58 273 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 F8W036 122 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 RPL36A-HNRNPH2H7BZ11 118 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 H7C0C1 242 aa1.62□□□□□ -2.15
VRK1-202ENST00000553683 hCG_2039718K7EN88 272 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms