RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ZNF391Q9UJN7 358 aa8.4□□□□□ -1.06
CHD8-204ENST00000553622 GSTK1Q9Y2Q3 226 aa8.4□□□□□ -1.06
CHD8-204ENST00000553622 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 TRBV5-5A0A0J9YX44 114 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SMIM31A0A1B0GVY4 71 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 A0A1W2PPW3 197 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ANKRD30BLA7E2S9 258 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 CD300LBA8K4G0 201 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 VSTM5A8MXK1 200 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SHISA9B4DS77 424 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ICMTO60725 284 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 GATBO75879 557 aaKnown RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 CLDN1O95832 211 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 COX6B1P14854 86 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 CCL1P22362 96 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ACKR3P25106 362 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 GLRXP35754 106 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 TGFBR1P36897 503 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SELENOVP59797 346 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 VBP1P61758 197 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 NCS1P62166 190 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 PPP3R1P63098 170 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 RIPPLY1Q0D2K3 151 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ALKBH6Q3KRA9 238 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 HSD17B12Q53GQ0 312 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 TMEM91Q6ZNR0 172 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SLC16A12Q6ZSM3 486 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 NUP37Q8NFH4 326 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 OR14K1Q8NGZ2 314 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SYNPRQ8TBG9 265 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 PIGCQ92535 297 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 THRSPQ92748 146 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 SPSB4Q96A44 273 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ISOC1Q96CN7 298 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 MARS2Q96GW9 593 aaKnown RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 KCTD7Q96MP8 289 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 DERL3Q96Q80 235 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 PAPOLGQ9BWT3 736 aaKnown RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 SLITRK2Q9H156 845 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 TCF7L1Q9HCS4 588 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 CA10Q9NS85 328 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 ZNF275Q9NSD4 429 aaPredicted RBP8.39□□□□□ -1.07
CHD8-204ENST00000553622 TAS2R4Q9NYW5 299 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 CMAHPQ9Y471 501 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 CEPT1Q9Y6K0 416 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 V9GYS6 101 aa8.39□□□□□ -1.07
CHD8-204ENST00000553622 LRRK2Q5S007 2527 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 SMIM30A4D0T7 59 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 ARL6IP5O75915 188 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 GABARAPO95166 117 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 IGLV3-1P01715 115 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 OR4A8P0C604 315 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 RAC2P15153 192 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 SELEP16581 610 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 IGFBP2P18065 325 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 TUBG1P23258 451 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 SERPINB10P48595 397 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 TMBIM6P55061 237 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 KLF3P57682 345 aaPredicted RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 NKX6-1P78426 367 aaPredicted RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 MXD1Q05195 221 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 PSG7Q13046 419 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 OR8B8Q15620 311 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 DMRTC1Q5HYR2 192 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 FBXW12Q6X9E4 464 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 MOB3CQ70IA8 216 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 LRP11Q86VZ4 500 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 SERPINA12Q8IW75 414 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 C1orf174Q8IYL3 243 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 FTMTQ8N4E7 242 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 CCDC54Q8NEL0 328 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 CSNK2A3Q8NEV1 391 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 OR13C9Q8NGT0 318 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 NPRL2Q8WTW4 380 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 TMEM171Q8WVE6 324 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 DVL3Q92997 716 aaPredicted RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 PPIL3Q9H2H8 161 aaKnown RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 PLK3Q9H4B4 646 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 BATF3Q9NR55 127 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 TUBG2Q9NRH3 451 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 GPR173Q9NS66 373 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 NDUFA13Q9P0J0 144 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 KCNN3Q9UGI6 736 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 RSL24D1Q9UHA3 163 aaKnown RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 PURGQ9UJV8 347 aaKnown RBP8.38□□□□□ -1.07
CHD8-204ENST00000553622 RHBDD3Q9Y3P4 386 aa8.38□□□□□ -1.07
CHD8-204ENST00000553622 TRAV8-7A0A075B6U6 113 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 TRBV5-7A0A0A0MS05 114 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 ZNF816-ZNF321PA0A0X1KG74 233 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 LOC390937A0A1W2PQ73 354 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 CLEC18AA5D8T8 446 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 A6NNC1 897 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 ZNF850A8MQ14 1090 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 E7EQL1 145 aa8.37□□□□□ -1.07
CHD8-204ENST00000553622 H3BMQ9 156 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms