RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 Q6ZSR3 168 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 Q6ZTC4 211 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 TMEM144Q7Z5S9 345 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 RALGPS2Q86X27 583 aaPredicted RBP2.95□□□□□ -1.94
TDP1-207ENST00000553617 SKA3Q8IX90 412 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 LRRC52Q8N7C0 313 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 HSD17B11Q8NBQ5 300 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 RASL10AQ92737 203 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 UFD1Q92890 307 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 FLYWCH2Q96CP2 140 aaKnown RBP2.95□□□□□ -1.94
TDP1-207ENST00000553617 TLCD1Q96CP7 247 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 CCDC126Q96EE4 140 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 MS4A14Q96JA4 679 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 Q96MT0 163 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 CNN2Q99439 309 aaKnown RBP2.95□□□□□ -1.94
TDP1-207ENST00000553617 PHB2Q99623 299 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 AIF1LQ9BQI0 150 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 RNF126Q9BV68 326 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 TMED9Q9BVK6 235 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 NUDT9Q9BW91 350 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 SRXN1Q9BYN0 137 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 CHRNA10Q9GZZ6 450 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 GFRA4Q9GZZ7 299 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 REEP4Q9H6H4 257 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 PATZ1Q9HBE1 687 aaKnown RBP2.95□□□□□ -1.94
TDP1-207ENST00000553617 TMEM27Q9HBJ8 222 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 TMBIM4Q9HC24 238 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 SDHAF2Q9NX18 166 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 BFARQ9NZS9 450 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 B4GALT7Q9UBV7 327 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 SLC17A4Q9Y2C5 497 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 NUBP2Q9Y5Y2 271 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 MTCH2Q9Y6C9 303 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 PRSS21Q9Y6M0 314 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 USH1CQ9Y6N9 552 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 NID2Q14112 1375 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 ERCC6Q03468 1493 aa2.95□□□□□ -1.94
TDP1-207ENST00000553617 TAF1LQ8IZX4 1826 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 NSG1A0A0A6YYJ2 146 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 DHRS7CA6NNS2 312 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 C21orf140B9A014 251 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 F5H768 121 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 PLPP1O14494 284 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 AZIN1O14977 448 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 UBDO15205 165 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 FGF16O43320 207 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RAD1O60671 282 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ZNF354AO60765 605 aaPredicted RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 SHOX2O60902 331 aaPredicted RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 MPZL1O95297 269 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 CNIH1O95406 144 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ATP6V1G2O95670 118 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RAB36O95755 333 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 CD160O95971 181 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ISG15P05161 165 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ZNF35P13682 527 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 PGAM2P15259 253 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 HIST1H1CP16403 213 aaKnown RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 UGT2B7P16662 529 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 FUT3P21217 361 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 FASP25445 335 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 S100PP25815 95 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 TNFSF9P41273 254 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 NSG1P42857 185 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RPL5P46777 297 aaKnown RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 GABRA4P48169 554 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 HCAR3P49019 387 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 PPOXP50336 477 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 VSX2P58304 361 aaPredicted RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 HMGCS1Q01581 520 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ACVR1Q04771 509 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ASAH1Q13510 395 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 PRR4Q16378 134 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 MAPK14Q16539 360 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 EIPR1Q53HC9 387 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ACTL10Q5JWF8 245 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 GFI1BQ5VTD9 330 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RPL13AP3Q6NVV1 102 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 DHRS4L2Q6PKH6 230 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 C2orf66Q6UXQ4 117 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 SLC25A48Q6ZT89 311 aaKnown RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 TMEM179Q6ZVK1 233 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ASCL5Q7RTU5 278 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 CMTM1Q8IZ96 169 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 LGI3Q8N145 548 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 MREGQ8N565 214 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 MAPK1IP1LQ8NDC0 245 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR5L1Q8NGL2 311 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR10X1Q8NGY0 326 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR6K3Q8NGY3 331 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR51A7Q8NH64 312 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR2AE1Q8NHA4 323 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 LYPD6BQ8NI32 183 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 OR8D1Q8WZ84 308 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 NEIL2Q969S2 332 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.94□□□□□ -1.94
TDP1-207ENST00000553617 ZNF641Q96N77 438 aaPredicted RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 PFDN5Q99471 154 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms