RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PRF1P14222 555 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 TBPP20226 339 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PSMB1P20618 241 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PRKACBP22694 351 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 BTCP35070 178 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SLC6A9P48067 706 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 NOVA1P51513 510 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 MECP2P51608 486 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 GALK2Q01415 458 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SPOCK1Q08629 439 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 ZMYND11Q15326 602 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 CNN3Q15417 329 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 CEACAM16Q2WEN9 425 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 OTPQ5XKR4 325 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 IGFL3Q6UXB1 125 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 TCTE3Q8IZS6 198 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SEMA6DQ8NFY4 1073 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 OR13C9Q8NGT0 318 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 OR6F1Q8NGZ6 308 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 OR52I2Q8NH67 350 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 GPX8Q8TED1 209 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SSC4DQ8WTU2 575 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 ABHD3Q8WU67 409 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SLC7A6Q92536 515 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 FAM46BQ96A09 425 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 UPRTQ96BW1 309 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SMAD5Q99717 465 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 URM1Q9BTM9 101 aaKnown RBP6.39□□□□□ -1.39
ATXN3-221ENST00000553498 OR2H1Q9GZK4 316 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 CHST5Q9GZS9 411 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PRDM14Q9GZV8 571 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 CST11Q9H112 138 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 ATG5Q9H1Y0 275 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 SLC6A15Q9H2J7 730 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 LDAHQ9H6V9 325 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 AUNIPQ9H7T9 357 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 CNTD2Q9H8S5 307 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 HRASLSQ9HDD0 168 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PCDHB16Q9NRJ7 776 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 MCUBQ9NWR8 336 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 PTTG3PQ9NZH4 202 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 RHBDD3Q9Y3P4 386 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 KMT2EQ8IZD2 1858 aa6.39□□□□□ -1.39
ATXN3-221ENST00000553498 FER1L5A0AVI2 2057 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 UNC13CQ8NB66 2214 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 BDP1A6H8Y1 2624 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TRAV18A0A075B6X5 111 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 A6NIN4 97 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TMEM14DPA8MWL7 114 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 AQP7O14520 342 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 NKX2-8O15522 239 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 SS18L1O75177 396 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ZNF780AO75290 641 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 PEX14O75381 377 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 CA11O75493 328 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TGM6O95932 706 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 F10P00742 488 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ADRB1P08588 477 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 MMP7P09237 267 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 FAM87AP0C7U9 286 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 AKAIN1P0CW23 69 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ZNF32P17041 273 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 MPZP25189 248 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 RCVRNP35243 200 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 HTR5AP47898 357 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TAS2R19P59542 299 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 RRAS2P62070 204 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 QRFPP83859 136 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 PSG4Q00888 419 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 PPA1Q15181 289 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TGIF1Q15583 401 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 RSPO1Q2MKA7 263 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TSPO2Q5TGU0 170 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 CD276Q5ZPR3 534 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 AWAT2Q6E213 333 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TMEM53Q6P2H8 277 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 COLCA1Q6ZS62 124 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 LIX1LQ8IVB5 337 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 LRRC18Q8N456 261 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 FTMTQ8N4E7 242 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 TMEM229BQ8NBD8 167 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 STEAP2Q8NFT2 490 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 OR56B1Q8NGI3 324 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 OR51A2Q8NGJ7 313 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ASB13Q8WXK3 278 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 AQP3Q92482 292 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 SPSB4Q96A44 273 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 WDYHV1Q96HA8 205 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 GMPPAQ96IJ6 420 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 BOD1Q96IK1 185 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ZNF845Q96IR2 970 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 FAM71F1Q96KD3 344 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 ALKBH3Q96Q83 286 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-221ENST00000553498 LRFN3Q9BTN0 628 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 HES7Q9BYE0 225 aa6.38□□□□□ -1.39
ATXN3-221ENST00000553498 UPB1Q9UBR1 384 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms