RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-202ENST00000553426 TIPRLO75663 272 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 ECDO95905 644 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-202ENST00000553426 RAP2AP10114 183 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 CALB2P22676 271 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 GSTT1P30711 240 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 GNALP38405 381 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 MICBQ29980 383 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 BRD3OSQ6XYD6 125 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 RHOUQ7L0Q8 258 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 SLC16A9Q7RTY1 509 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 DPY19L4Q7Z388 723 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-202ENST00000553426 ERI1Q8IV48 349 aaKnown RBP10.6□□□□□ -0.71
LINC00643-202ENST00000553426 OR10G2Q8NGC3 310 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 OR6N2Q8NGY6 317 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 OR4Q3Q8NH05 313 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 GATAD2BQ8WXI9 593 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 SPSB4Q96A44 273 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 REEP6Q96HR9 211 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 FAM71F1Q96KD3 344 aaPredicted RBP10.6□□□□□ -0.71
LINC00643-202ENST00000553426 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF696Q9H7X3 374 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 MARCH7Q9H992 704 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 CMC2Q9NRP2 79 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 ARMC1Q9NVT9 282 aa10.6□□□□□ -0.71
LINC00643-202ENST00000553426 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 A0A1B0GUS0 222 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 ANXA2P2A6NMY6 339 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 SRRM5B3KS81 715 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 GYPAP02724 150 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CLUP10909 449 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 MUC1P15941 1255 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-202ENST00000553426 HOXB6P17509 224 aaKnown RBP10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CFHR2P36980 270 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 NAA10P41227 235 aaPredicted RBP10.59□□□□□ -0.71
LINC00643-202ENST00000553426 FAM3AP98173 230 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 PDCD1Q15116 288 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 DEFB112Q30KQ8 113 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 GFOD2Q3B7J2 385 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CD300LDQ6UXZ3 194 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 FAM57BQ71RH2 274 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CSNK2A3Q8NEV1 391 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 GIPC3Q8TF64 312 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 RNF133Q8WVZ7 376 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 TMIGD2Q96BF3 282 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 TEX12Q9BXU0 123 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 RGCCQ9H4X1 137 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 RNPEPL1Q9HAU8 725 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 DNAJC27Q9NZQ0 273 aa10.59□□□□□ -0.71
LINC00643-202ENST00000553426 PRPF19Q9UMS4 504 aaKnown RBP10.59□□□□□ -0.71
LINC00643-202ENST00000553426 CMYA5Q8N3K9 4069 aa10.58□□□□□ -0.71
LINC00643-202ENST00000553426 C5orf63A6NC05 138 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 DVL1O14640 695 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 GLCEO94923 617 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 CST1P01037 141 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 LHBP01229 141 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 H2BFMP0C1H6 154 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 PSKH1P11801 424 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 IL5RAQ01344 420 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 TEX36Q5VZQ5 186 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 BTN2A1Q7KYR7 527 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 SLC36A1Q7Z2H8 476 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 FAM90A1Q86YD7 464 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 CCDC197Q8NCU1 140 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 OR1M1Q8NGA1 313 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 ST8SIA4Q92187 359 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 SGK3Q96BR1 496 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 CCDC124Q96CT7 223 aaKnown RBP10.58□□□□□ -0.72
LINC00643-202ENST00000553426 ASB9Q96DX5 294 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 WDFY2Q96P53 400 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 FEVQ99581 238 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 MICU1Q9BPX6 476 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 ABHD6Q9BV23 337 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 PAPOLGQ9BWT3 736 aaKnown RBP10.58□□□□□ -0.72
LINC00643-202ENST00000553426 SLITRK2Q9H156 845 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 OR51V1Q9H2C8 321 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 PRDM13Q9H4Q3 707 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 ZNF556Q9HAH1 456 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 BRD7Q9NPI1 651 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 KAAG1Q9UBP8 84 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
LINC00643-202ENST00000553426 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
LINC00643-202ENST00000553426 MDFIC2A0A1B0GVS7 189 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 ARRDC5A6NEK1 342 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 FAM183AA6NL82 134 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 PRR23D1E9PI22 279 aaPredicted RBP10.57□□□□□ -0.72
LINC00643-202ENST00000553426 TNFRSF13BO14836 293 aaPredicted RBP10.57□□□□□ -0.72
LINC00643-202ENST00000553426 GPR37O15354 613 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 E2F6O75461 281 aa10.57□□□□□ -0.72
LINC00643-202ENST00000553426 HMGN1P05114 100 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms