RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ISG15P05161 165 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 CFL1P23528 166 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 WNT4P56705 351 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 ACSM1Q08AH1 577 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 GFOD2Q3B7J2 385 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 CCDC58Q4VC31 144 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 SPRNQ5BIV9 151 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 OR8G5Q8NG78 346 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 OR10AC1Q8NH08 325 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 ITFG2Q969R8 447 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 PGLYRP3Q96LB9 341 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 PPP1R3EQ9H7J1 279 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 MSL2Q9HCI7 577 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 BEX4Q9NWD9 120 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 BLOC1S6Q9UL45 172 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 V9GYS6 101 aa12.63□□□□□ -0.39
MTHFD1-204ENST00000553405 ITPR3Q14573 2671 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 TIMM8AO60220 97 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 DHRS3O75911 302 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 IGHV1-46P01743 117 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 UBCP0CG48 685 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 SELEP16581 610 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 PCMT1P22061 227 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 DDOSTP39656 456 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 MAP2K4P45985 399 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 PTH2RP49190 550 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 CDH15P55291 814 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 SELENOVP59797 346 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 NKPD1Q17RQ9 610 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 DEFB113Q30KQ7 82 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 TMEM42Q69YG0 159 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 RPL22L1Q6P5R6 122 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 DNM1P46Q6ZS02 220 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 BHLHE23Q8NDY6 225 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 MND1Q9BWT6 205 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 NKIRAS2Q9NYR9 191 aa12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 MRPL15Q9P015 296 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 FBXO9Q9UK97 447 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-204ENST00000553405 CELSR1Q9NYQ6 3014 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 DHRS7CA6NNS2 312 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 H0YL77 283 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 LMX1BO60663 402 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 CD55P08174 381 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 ATP6V1B1P15313 513 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 DNASE1P24855 282 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 LIPAP38571 399 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 MAGEB1P43366 347 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 ZNF81P51508 661 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 BDH1Q02338 343 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 MOGQ16653 247 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 LRRC75A-AS1Q8N1F1 130 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 OR51A4Q8NGJ6 313 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 UBASH3BQ8TF42 649 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 SMIM19Q96E16 107 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 FAM71F1Q96KD3 344 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 TPK1Q9H3S4 243 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 MS4A5Q9H3V2 200 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 CXorf56Q9H5V9 222 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 CHCHD3Q9NX63 227 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 GTF2A1LQ9UNN4 478 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 ERGIC3Q9Y282 383 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 PMF1-BGLAPU3KQ54 211 aa12.61□□□□□ -0.39
MTHFD1-204ENST00000553405 GGT3PA6NGU5 568 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 TRIM64CA6NLI5 447 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 MYL12BO14950 172 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 LY6HO94772 140 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 PTBP3O95758 552 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 CST4P01036 141 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 HPXP02790 462 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 CD1AP06126 327 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 ACHEP22303 614 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 CHN2P52757 468 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 EMX1Q04741 257 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 SPHARQ15513 63 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 ZBTB37Q5TC79 503 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 ZNF773Q6PK81 442 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 DOK3Q7L591 496 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 ZFP41Q8N8Y5 198 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 OR13G1Q8NGZ3 307 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms