RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SYNJ2BPP57105 145 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 TAS2R46P59540 309 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 TPBGQ13641 420 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 ZBTB6Q15916 424 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 BSXQ3C1V8 233 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF544Q6NX49 715 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 EPGNQ6UW88 154 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 LYPD2Q6UXB3 125 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SSX7Q7RTT5 188 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 NECAP1Q8NC96 275 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF485Q8NCK3 441 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 GPR26Q8NDV2 337 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 OR2L5Q8NG80 312 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 WFIKKN1Q96NZ8 548 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 VAT1Q99536 393 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 PDCD1LG2Q9BQ51 273 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 C7orf50Q9BRJ6 194 aaKnown RBP4.1□□□□□ -1.75
SCFD1-208ENST00000553278 COA1Q9GZY4 146 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SPNS1Q9H2V7 528 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 RBAKQ9NYW8 714 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF225Q9UK10 706 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SLC7A11Q9UPY5 501 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SIGLEC9Q9Y336 463 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 IGHV3-74A0A0B4J1X5 117 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 A0A0J9YXV3 536 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 FAM240AA0A1B0GVK7 77 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 LINC01619G3V211 115 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 CLDN34H7C241 214 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 SULT1C2O00338 296 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 PHOX2AO14813 284 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 HDAC3O15379 428 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 GABARAPO95166 117 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 RCBTB2O95199 551 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 IGHV4-34P06331 123 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 S100A6P06703 90 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 GP1BAP07359 652 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 CTRLP40313 264 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 MAGEA3P43357 314 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 CDKN2DP55273 166 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 OR12D2P58182 307 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 MTPNP58546 118 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 UBE2G2P60604 165 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 FLOT2Q14254 428 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 CAPRIN1Q14444 709 aaKnown RBP4.09□□□□□ -1.75
SCFD1-208ENST00000553278 GUSBP1Q15486 140 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 OTPQ5XKR4 325 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 DNAJC24Q6P3W2 148 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 C6orf120Q7Z4R8 191 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 SLC7A5P1Q8MH63 180 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 ATPAF2Q8N5M1 289 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 OR10G4Q8NGN3 311 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 RXFP2Q8WXD0 754 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 PRORYQ9H606 182 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 TMEM27Q9HBJ8 222 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 SLC38A10Q9HBR0 1119 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 TNFRSF19Q9NS68 423 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 SCML1Q9UN30 329 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 WIF1Q9Y5W5 379 aa4.09□□□□□ -1.75
SCFD1-208ENST00000553278 IGHV1-69DA0A0B4J2H0 117 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 SLC5A10A0PJK1 596 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 H0Y9J4 135 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 LAD1O00515 517 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 IGLV2-23P01705 113 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 CTSLP07711 333 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 RD3LP0DJH9 198 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 TALDO1P37837 337 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 PLTPP55058 493 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 UBE2IP63279 158 aaKnown RBP4.08□□□□□ -1.76
SCFD1-208ENST00000553278 PIGHQ14442 188 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-208ENST00000553278 PON2Q15165 354 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 ORMDL2Q53FV1 153 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 TCEAL5Q5H9L2 206 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 TMEM255AQ5JRV8 349 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 Q6ZVH6 145 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 MRPL52Q86TS9 123 aaKnown RBP4.08□□□□□ -1.76
SCFD1-208ENST00000553278 NKAIN4Q8IVV8 208 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 PALLDQ8WX93 1383 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 RORBQ92753 470 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 TCEAL3Q969E4 200 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 SLC35E1Q96K37 410 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 ALS2CR12Q96Q35 445 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 TOLLIPQ9H0E2 274 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 SLC38A1Q9H2H9 487 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 IFT46Q9NQC8 304 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 HES2Q9Y543 173 aa4.08□□□□□ -1.76
SCFD1-208ENST00000553278 BRCA1P38398 1863 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 MYO3BQ8WXR4 1341 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 FABP12A6NFH5 140 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 M0QXV9 152 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 MYL12BO14950 172 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 CRTAPO75718 401 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 CD8AP01732 235 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 HSPD1P10809 573 aaKnown RBP4.07□□□□□ -1.76
SCFD1-208ENST00000553278 NUDT1P36639 197 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 CXCL5P42830 114 aa4.07□□□□□ -1.76
SCFD1-208ENST00000553278 RPS9P46781 194 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms