RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CELF2-AS1Q8N7Q2 184 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 CSNK2A3Q8NEV1 391 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 ITLN1Q8WWA0 313 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 SGK3Q96BR1 496 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 AASSQ9UDR5 926 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 EXOGQ9Y2C4 368 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 R4GMQ9 66 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 HSPE1-MOB4S4R3N1 261 aa9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-209ENST00000552896 NIPBLQ6KC79 2804 aaeCLIP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ANKRD30BLA7E2S9 258 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 F5H5P2 479 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 H0YJX3 145 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 H0YL77 283 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 PPIHO43447 177 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 CLIC3O95833 236 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 IGLV3-1P01715 115 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 IGHA1P01876 353 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 CA6P23280 308 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ACTA2P62736 377 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ACTG2P63267 376 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF85Q03923 595 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 RAB40BQ12829 278 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 OR8G1Q15617 311 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 CDONQ4KMG0 1287 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 SPRNQ5BIV9 151 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 PLEKHG7Q6ZR37 379 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ACBD7Q8N6N7 88 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 NRG4Q8WWG1 115 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 LGALS12Q96DT0 336 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 MRPL48Q96GC5 212 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 LYZL4Q96KX0 146 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 MYCBPQ99417 103 aaPredicted RBP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 SMR3AQ99954 134 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 PBOV1Q9GZY1 135 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 ABCB9Q9NP78 766 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 INPP5EQ9NRR6 644 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 MRPS18AQ9NVS2 196 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 PPP1R3CQ9UQK1 317 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 RPL36Q9Y3U8 105 aaKnown RBP9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 SNX5Q9Y5X3 404 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 CACNG2Q9Y698 323 aa9.91□□□□□ -0.82
TRAFD1-209ENST00000552896 SETD2Q9BYW2 2564 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 NF1P21359 2839 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 DAPL1A0PJW8 107 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 MAGEB4O15481 346 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 PTBP3O95758 552 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 FADS2O95864 444 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 PNPP00491 289 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 TTRP02766 147 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 HLA-DPB1P04440 258 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 ATP6V1B1P15313 513 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 MZT1Q08AG7 82 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 RIPK1Q13546 671 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 ZNF181Q2M3W8 571 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 LIPNQ5VXI9 398 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 CLEC9AQ6UXN8 241 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 COMMD2Q86X83 199 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 C8orf59Q8N0T1 100 aaPredicted RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 SPERTQ8NA61 448 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 CNIH3Q8TBE1 160 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 CCL17Q92583 94 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 HPS1Q92902 700 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 PAPOLGQ9BWT3 736 aaKnown RBP9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 JAM3Q9BX67 310 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 GCM1Q9NP62 436 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 G6PC2Q9NQR9 355 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 TMEM106BQ9NUM4 274 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 ACOXLQ9NUZ1 547 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 GNG8Q9UK08 70 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 OR52A1Q9UKL2 312 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 GTF2A1LQ9UNN4 478 aa9.9□□□□□ -0.82
TRAFD1-209ENST00000552896 IRGMA1A4Y4 181 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 CD5LO43866 347 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 FAM20BO75063 409 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 DHRS3O75911 302 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 LY6G6DO95868 133 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 GNAO1P09471 354 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 ACKR3P25106 362 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 GNALP38405 381 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 MAP2K3P46734 347 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 GZMKP49863 264 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 AQP4P55087 323 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 SMN1Q16637 294 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 TP53I3Q53FA7 332 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 KLHL22Q53GT1 634 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 ZBTB37Q5TC79 503 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 KRT74Q7RTS7 529 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 KCTD20Q7Z5Y7 419 aa9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 PEG10Q86TG7 708 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-209ENST00000552896 CATSPERDQ86XM0 798 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms