RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	AMY2B	P19961	511 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	ACSM1	Q08AH1	577 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	IKZF1	Q13422	519 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	DGCR6	Q14129	220 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	SMARCD3	Q6STE5	483 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	WDR86	Q86TI4	376 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	LYG1	Q8N1E2	194 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	OR56B2P	Q8NGI1	322 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	OR4K13	Q8NH42	304 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	SEH1L	Q96EE3	360 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	HSH2D	Q96JZ2	352 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	SSX3	Q99909	188 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	SIKE1	Q9BRV8	207 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	FAM234A	Q9H0X4	552 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	RPRD1B	Q9NQG5	326 aa	Known RBP	13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	MRPL22	Q9NWU5	206 aa	Known RBP	13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	CMTM6	Q9NX76	183 aa		13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.79	□□□□□ -0.2
CACNB3-222	ENST00000552465	LOC100653049	A0A140TA62	436 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	CXCR6	O00574	342 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	ARPC3	O15145	178 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	KRT34	O76011	436 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	VSIG10L2	P0DP72	767 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	TROVE2	P10155	538 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	HIST1H1C	P16403	213 aa	Known RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	OTX1	P32242	354 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	EMX1	Q04741	257 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	KLF10	Q13118	480 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	LY6E	Q16553	131 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	LRRC10	Q5BKY1	277 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	NCR3LG1	Q68D85	454 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	CRIP3	Q6Q6R5	217 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	DRAM2	Q6UX65	266 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	LNX2	Q8N448	690 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	OR4S1	Q8NGB4	309 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	OR8S1	Q8NH09	359 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	C17orf50	Q8WW18	174 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	C12orf43	Q96C57	262 aa	Known RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	ATP6V1G3	Q96LB4	118 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	INTS9	Q9NV88	658 aa	Known RBP	13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	KCNG2	Q9UJ96	466 aa		13.78	□□□□□ -0.2
CACNB3-222	ENST00000552465	TRBV4-1	A0A0J9YWV2	114 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR6C68	A6NDL8	312 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	EDF1	O60869	148 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	SEC23B	Q15437	767 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	NSUN5P1	Q3KNT7	163 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	FGD3	Q5JSP0	725 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	WDR82	Q6UXN9	313 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	DPY19L4	Q7Z388	723 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR1M1	Q8NGA1	313 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	H1FX	Q92522	213 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	RORB	Q92753	470 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	PHF21A	Q96BD5	680 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	CLPTM1L	Q96KA5	538 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	FN3K	Q9H479	309 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	METTL8	Q9H825	291 aa	Known RBP	13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	AP3M1	Q9Y2T2	418 aa		13.77	□□□□□ -0.21
CACNB3-222	ENST00000552465	ANKRD30BL	A7E2S9	258 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465		M0R1W7	72 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	SERPINA1	P01009	418 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	SELL	P14151	372 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	ZNF823	P16415	610 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	SLC6A6	P31641	620 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	DDOST	P39656	456 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	NAA10	P41227	235 aa	Predicted RBP	13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	CSNK2B	P67870	215 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	LIPE	Q05469	1076 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	MAPRE2	Q15555	327 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	PGBD2	Q6P3X8	592 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR5T2	Q8NGG2	359 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR51G2	Q8NGK0	314 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR9Q1	Q8NGQ5	310 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	AJUBA	Q96IF1	538 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	NSRP1	Q9H0G5	558 aa	Known RBP	13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	MEGF9	Q9H1U4	602 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	MMP28	Q9H239	520 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	OPA3	Q9H6K4	179 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	RAB18	Q9NP72	206 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	MRGBP	Q9NV56	204 aa		13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	SF3B6	Q9Y3B4	125 aa	Known RBP	13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	FAM32A	Q9Y421	112 aa	Known RBP	13.76	□□□□□ -0.21
CACNB3-222	ENST00000552465	MEGF11	A6BM72	1044 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	GSTA4	O15217	222 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	VSIG8	P0DPA2	414 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	RPS27	P42677	84 aa	Known RBP	13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	LRRC75B	Q2VPJ9	315 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	FOXB2	Q5VYV0	432 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	STUM	Q69YW2	141 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	HCP5	Q6MZN7	132 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	SLC15A3	Q8IY34	581 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	DTX3	Q8N9I9	347 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	FANK1	Q8TC84	345 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	SPSB4	Q96A44	273 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	IFT27	Q9BW83	186 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	NPFFR1	Q9GZQ6	430 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	OR52D1	Q9H346	318 aa		13.75	□□□□□ -0.21
CACNB3-222	ENST00000552465	SAR1A	Q9NR31	198 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms