RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SEC14L4Q9UDX3 406 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 BAIAP2L1Q9UHR4 511 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PSORS1C1Q9UIG5 152 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 DKKL1Q9UK85 242 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PSME2Q9UL46 239 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MCTS1Q9ULC4 181 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PYCARDQ9ULZ3 195 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MOKQ9UQ07 419 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 MGAT4BQ9UQ53 548 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ETV7Q9Y603 341 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 CACNG2Q9Y698 323 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SPACA6W5XKT8 324 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ARHGAP32A7KAX9 2087 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 LOC105371242A0A075B767 164 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 C15orf61A6NNL5 157 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 A8MXK9 166 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 B4DSR2 109 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SLC28A1O00337 649 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HMGN4O00479 90 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CCSO14618 274 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SURF4O15260 269 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MLNRO43193 412 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF264O43296 627 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF208O43345 1280 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SSX5O60225 188 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CLPXO76031 633 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MFN2O95140 757 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 NXPH2O95156 264 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 FSTL3O95633 263 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HPRP00739 348 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV2-5P01817 119 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CHRNGP07510 517 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SFTPBP07988 381 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MSMBP08118 114 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MMP7P09237 267 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 NUDT17P0C025 328 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 OR4A8P0C604 315 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PATE4P0C8F1 98 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PRG2P13727 222 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 GFAPP14136 432 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF250P15622 560 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ACKR3P25106 362 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 IL12BP29460 328 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 FABP6P51161 128 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 LUMP51884 338 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CCNG1P51959 295 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM33P57088 247 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 KRTAP10-11P60412 298 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SSTP61278 116 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 IL1RL1Q01638 556 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 DHODHQ02127 395 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 C2orf80Q0P641 193 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 GPR50Q13585 617 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CASP8Q14790 479 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HEPACAMQ14CZ8 416 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PPP1R7Q15435 360 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SLC9A3R2Q15599 337 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 UAP1Q16222 522 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CARTPTQ16568 116 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 RSPO1Q2MKA7 263 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ARHGAP11BQ3KRB8 267 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 DCST2Q5T1A1 773 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PDZK1Q5T2W1 519 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SAXO2Q658L1 398 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CLEC6AQ6EIG7 209 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PAQR6Q6TCH4 344 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CLEC2AQ6UVW9 174 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 DLEU7Q6UYE1 221 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZYG11AQ6WRX3 759 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF841Q6ZN19 808 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 Q6ZR03 302 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 GPRIN3Q6ZVF9 776 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 P4HA3Q7Z4N8 544 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZER1Q7Z7L7 766 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 LCA5Q86VQ0 697 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 STHQ8IWL8 128 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CLEC4FQ8N1N0 589 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 RIBC1Q8N443 379 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 KRTCAP2Q8N6L1 136 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CCDC197Q8NCU1 140 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 OR5D16Q8NGK9 328 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ST8SIA1Q92185 356 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 GTF3AQ92664 365 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MRPL24Q96A35 216 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM186Q96B77 213 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SLCO4A1Q96BD0 722 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF486Q96H40 463 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SH3YL1Q96HL8 342 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PRAC1Q96KF2 57 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 LRR1Q96L50 414 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 C2orf48Q96LS8 159 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 NSMCE2Q96MF7 247 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MS4A4EQ96PG1 132 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF317Q96PQ6 595 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SLC38A2Q96QD8 506 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 TSPAN32Q96QS1 320 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF426Q9BUY5 554 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF416Q9BWM5 594 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 FAIM2Q9BWQ8 316 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms