RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HTR1AP08908 422 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 EPHA1P21709 976 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 OPRL1P41146 370 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 CRYBB2P43320 205 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 PPP1CBP62140 327 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 HNRNPA0Q13151 305 aaKnown RBP11.37□□□□□ -0.59
NUP188-211ENST00000550219 SCGB2A2Q13296 93 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 GALEQ14376 348 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 IRF3Q14653 427 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 RSPO1Q2MKA7 263 aaPredicted RBP11.37□□□□□ -0.59
NUP188-211ENST00000550219 TMEM255AQ5JRV8 349 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ZNF774Q6NX45 483 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ZNF322Q6U7Q0 402 aaPredicted RBP11.37□□□□□ -0.59
NUP188-211ENST00000550219 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 PRSS48Q7RTY5 328 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 SEMA6DQ8NFY4 1073 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 OR1F12Q8NHA8 337 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
NUP188-211ENST00000550219 THEM6Q8WUY1 208 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 CCL17Q92583 94 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 SLAMF6Q96DU3 332 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 POM121L2Q96KW2 1035 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 TBX5Q99593 518 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 COQ7Q99807 217 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 HDHD2Q9H0R4 259 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ZNF696Q9H7X3 374 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 PLEK2Q9NYT0 353 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 ERVK-18Q9QC07 812 aa11.37□□□□□ -0.59
NUP188-211ENST00000550219 DAPL1A0PJW8 107 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ZNF878C9JN71 531 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 RGS10O43665 173 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 PLPP2O43688 288 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 DOK2O60496 412 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ZNF254O75437 659 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 SULT1C4O75897 302 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 TNFAIP8O95379 198 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ABHD16AO95870 558 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 IGHV2-5P01817 119 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ADRA2CP18825 462 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 OTX1P32242 354 aaPredicted RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 ETV1P50549 477 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ECH1Q13011 328 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 CDONQ4KMG0 1287 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 KCTD20Q7Z5Y7 419 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 LHFPL3Q86UP9 236 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ZNF679Q8IYX0 411 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 ALDH16A1Q8IZ83 802 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 RAB1CQ92928 201 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 MARS2Q96GW9 593 aaKnown RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 OR8B4Q96RC9 309 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 MYCBPQ99417 103 aaPredicted RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 G6PC2Q9NQR9 355 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 CLEC2DQ9UHP7 191 aa11.36□□□□□ -0.59
NUP188-211ENST00000550219 MRM2Q9UI43 246 aaKnown RBP11.36□□□□□ -0.59
NUP188-211ENST00000550219 A0A0G2JMP0 313 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 A0A0X1KG70 313 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
NUP188-211ENST00000550219 MT-ND2P03891 347 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 MYL12AP19105 171 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 DCTDP32321 178 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 MMP15P51511 669 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 FAM209AQ5JX71 171 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 DCAF12L2Q5VW00 463 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 PLEKHG7Q6ZR37 379 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 C1orf229Q6ZS94 237 aaPredicted RBP11.35□□□□□ -0.59
NUP188-211ENST00000550219 SYS1Q8N2H4 156 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 ZNF485Q8NCK3 441 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 OR4M2Q8NGB6 313 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 MRPL48Q96GC5 212 aaKnown RBP11.35□□□□□ -0.59
NUP188-211ENST00000550219 ATF6BQ99941 703 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 NIPAL2Q9H841 368 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 ELOVL3Q9HB03 270 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 MSL2Q9HCI7 577 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 CENPMQ9NSP4 180 aa11.35□□□□□ -0.59
NUP188-211ENST00000550219 CAB39Q9Y376 341 aaPredicted RBP11.35□□□□□ -0.59
NUP188-211ENST00000550219 A0A0A6YYJ9 748 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 METTL15A6NJ78 407 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 NGFP01138 241 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 AVPP01185 164 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 HTR5AP47898 357 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 OR12D2P58182 307 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 ACTA2P62736 377 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 GRB2P62993 217 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 ACTG2P63267 376 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 LCN2P80188 198 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 SPRNQ5BIV9 151 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 LRRN1Q6UXK5 716 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms