RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SVOPQ8N4V2 548 aa18.09■□□□□ 0.49
VPS29-206ENST00000549578 RPS4Y2Q8TD47 263 aa18.09■□□□□ 0.49
VPS29-206ENST00000549578 ZNF696Q9H7X3 374 aa18.09■□□□□ 0.49
VPS29-206ENST00000549578 A0A1B0GVI7 797 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 PLSCR5A0PG75 271 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 ZSCAN5BA6NJL1 495 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 TMEM212A6NML5 194 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 SYT7O43581 403 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 RAF1P04049 648 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 HSMCR30P0CW71 290 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 CD53P19397 219 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 CCL1P22362 96 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 TAS2R43P59537 309 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 MOGQ16653 247 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 DMKNQ6E0U4 476 aaPredicted RBP18.08■□□□□ 0.49
VPS29-206ENST00000549578 Q6ZR03 302 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 DOK3Q7L591 496 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 PLPP7Q8NBV4 271 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 OR10AC1Q8NH08 325 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 OR5AK2Q8NH90 309 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 SMIM19Q96E16 107 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 NR1H4Q96RI1 486 aaPredicted RBP18.08■□□□□ 0.49
VPS29-206ENST00000549578 GPR160Q9UJ42 338 aa18.08■□□□□ 0.49
VPS29-206ENST00000549578 DHRS3O75911 302 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 ISG15P05161 165 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 CELP19835 753 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 PCMT1P22061 227 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 ACSM1Q08AH1 577 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 TMEM244Q5VVB8 128 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 OR8G5Q8NG78 346 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 OR51A4Q8NGJ6 313 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 COMMD4Q9H0A8 199 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 TPK1Q9H3S4 243 aa18.08■□□□□ 0.48
VPS29-206ENST00000549578 USF3Q68DE3 2245 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 LOC390937A0A1W2PQ73 354 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 OVOL3O00110 214 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 LMX1BO60663 402 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 MTRF1O75570 445 aaKnown RBP18.07■□□□□ 0.48
VPS29-206ENST00000549578 BMP4P12644 408 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 DDOSTP39656 456 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 MAP2K3P46734 347 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 ZNF81P51508 661 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 BDH1Q02338 343 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 ZNF367Q7RTV3 350 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 SEMA6DQ8NFY4 1073 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 TSPAN14Q8NG11 270 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 OR14K1Q8NGZ2 314 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 RGP1Q92546 391 aaPredicted RBP18.07■□□□□ 0.48
VPS29-206ENST00000549578 VRK1Q99986 396 aaPredicted RBP18.07■□□□□ 0.48
VPS29-206ENST00000549578 PMF1-BGLAPU3KQ54 211 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 V9GYS6 101 aa18.07■□□□□ 0.48
VPS29-206ENST00000549578 A6NIN4 97 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 SPRY3O43610 288 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 FAHP16930 419 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 ACHEP22303 614 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 PPOXP50336 477 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 GHSRQ92847 366 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 PGLYRP3Q96LB9 341 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 MGLLQ99685 303 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 SLC30A2Q9BRI3 323 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 CXorf56Q9H5V9 222 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 PPP1R3EQ9H7J1 279 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 CYSLTR2Q9NS75 346 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 CGGBP1Q9UFW8 167 aaPredicted RBP18.06■□□□□ 0.48
VPS29-206ENST00000549578 HHLA2Q9UM44 414 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 PIGLQ9Y2B2 252 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 RHBDD3Q9Y3P4 386 aa18.06■□□□□ 0.48
VPS29-206ENST00000549578 C17orf100A8MU93 164 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 ANKRD17O75179 2603 aaKnown RBP18.05■□□□□ 0.48
VPS29-206ENST00000549578 HLA-DPB1P04440 258 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 ATP6V1B1P15313 513 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 CA6P23280 308 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 LIPAP38571 399 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 Q6ZSR3 168 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 CSNK2A3Q8NEV1 391 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 OR10AD1Q8NGE0 317 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 DVL3Q92997 716 aaPredicted RBP18.05■□□□□ 0.48
VPS29-206ENST00000549578 PIGTQ969N2 578 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 OPALINQ96PE5 141 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 MS4A5Q9H3V2 200 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 TMEM100Q9NV29 134 aa18.05■□□□□ 0.48
VPS29-206ENST00000549578 MRPL15Q9P015 296 aaKnown RBP18.05■□□□□ 0.48
VPS29-206ENST00000549578 A0A087WXM4 84 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 ANKRD30BLA7E2S9 258 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 H0YL77 283 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 H7C417 338 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 MLNRO43193 412 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 PLPP2O43688 288 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 IGHV1-46P01743 117 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 MAGEB1P43366 347 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 RIPPLY1Q0D2K3 151 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 MLLT11Q13015 90 aaPredicted RBP18.04■□□□□ 0.48
VPS29-206ENST00000549578 ZMAT1Q5H9K5 638 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 UBE2UQ5VVX9 321 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 LIPKQ5VXJ0 399 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 OR2Z1Q8NG97 314 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 OR13C5Q8NGS8 318 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 OR13G1Q8NGZ3 307 aa18.04■□□□□ 0.48
VPS29-206ENST00000549578 PAPOLGQ9BWT3 736 aaKnown RBP18.04■□□□□ 0.48
VPS29-206ENST00000549578 PLEKHA1Q9HB21 404 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms