RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 RFPL4BQ6ZWI9 263 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 LRRTM1Q86UE6 522 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF101Q8IZC7 436 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 GALNT11Q8NCW6 608 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC30A7Q8NEW0 376 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 OR52H1Q8NGJ2 320 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 OR13C3Q8NGS6 347 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC25A46Q96AG3 418 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SGK3Q96BR1 496 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 REEP6Q96HR9 211 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 FAM71F1Q96KD3 344 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC30A2Q9BRI3 323 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 ACTR6Q9GZN1 396 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 OR10A2Q9H208 303 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 ELOVL5Q9NYP7 299 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 TAS2R4Q9NYW5 299 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 PLEKHB1Q9UF11 243 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 DHDHQ9UQ10 334 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 V9GYS6 101 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 A6NIN4 97 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 CASKO14936 926 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ICMTO60725 284 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 DHRS3O75911 302 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ARL6IP5O75915 188 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 GHRHP01286 108 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 RAF1P04049 648 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF35P13682 527 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 SRMP19623 302 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ACKR3P25106 362 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 CHRNB4P30926 498 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 CALCRP30988 508 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ASCL1P50553 236 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 TBC1D28Q2M2D7 210 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC25A35Q3KQZ1 300 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 FBXL19-AS1Q494R0 122 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF529Q6P280 563 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 DOK3Q7L591 496 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 COMMD2Q86X83 199 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 PARP16Q8N5Y8 322 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 FAM169BQ8N8A8 192 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 STEAP2Q8NFT2 490 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 OR51A2Q8NGJ7 313 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 TBC1D15Q8TC07 691 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 FGGYQ96C11 551 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 NXF2Q9GZY0 626 aaKnown RBP6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 TPK1Q9H3S4 243 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF275Q9NSD4 429 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 CRIM1Q9NZV1 1036 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 STARD10Q9Y365 291 aa6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 UBR5O95071 2799 aaPredicted RBP6.98□□□□□ -1.29
DEPDC4-207ENST00000549249 IGHV2OR16-5A0A0B4J2B6 119 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 LOC390937A0A1W2PQ73 354 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 NKX2-6A6NCS4 301 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 C16orf97H3BN30 126 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 XRCC2O43543 280 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 SMPD2O60906 423 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 CLPXO76031 633 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 THBDP07204 575 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 FAHP16930 419 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 RAB3BP20337 219 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 THBS2P35442 1172 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 DDOSTP39656 456 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF83P51522 516 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 ERVS71-1P61550 626 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 FAM3AP98173 230 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 LSAMPQ13449 338 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 PPA1Q15181 289 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 OR8B8Q15620 311 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 DGUOKQ16854 277 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 C3orf36Q3SXR2 165 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 TMEM255AQ5JRV8 349 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 TPRA1Q86W33 373 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 OR5AS1Q8N127 324 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 DNAAF1Q8NEP3 725 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 LILRB4Q8NHJ6 448 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 THRSPQ92748 146 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 APOBEC3DQ96AK3 386 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 NKX3-1Q99801 234 aaPredicted RBP6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 OR10A4Q9H209 315 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 OR51B6Q9H340 312 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 SP140LQ9H930 580 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 CDH20Q9HBT6 801 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 TCF7L1Q9HCS4 588 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 TBCCD1Q9NVR7 557 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 PTTG3PQ9NZH4 202 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 FOXJ3Q9UPW0 622 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 AK6Q9Y3D8 172 aaKnown RBP6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 RHBDD3Q9Y3P4 386 aa6.97□□□□□ -1.29
DEPDC4-207ENST00000549249 SPTAN1Q13813 2472 aaKnown RBP6.96□□□□□ -1.29
DEPDC4-207ENST00000549249 A0A0B4J203 849 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 A0A1B0GUH1 482 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 NOTOA8MTQ0 251 aa6.96□□□□□ -1.3
DEPDC4-207ENST00000549249 M0R1B8 84 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms