RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BOLLQ8N9W6 283 aaKnown RBP10.62□□□□□ -0.71
PTCH1-218ENST00000548945 SDR9C7Q8NEX9 313 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 OR2T4Q8NH00 348 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 LINC01006Q8NI28 216 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 LRTOMTQ8WZ04 291 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 LHX4Q969G2 390 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
PTCH1-218ENST00000548945 PYURFQ96I23 114 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 DPAGT1Q9H3H5 408 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 FN3KQ9H479 309 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 RNPEPL1Q9HAU8 725 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 C1orf123Q9NWV4 160 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 CD300AQ9UGN4 299 aa10.62□□□□□ -0.71
PTCH1-218ENST00000548945 A0A1B0GVI7 797 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 BHLHE40O14503 412 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 DVL1O14640 695 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GPR37O15354 613 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 XRCC2O43543 280 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 IGHV4-59P01825 116 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GYPAP02724 150 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 MUC1P15941 1255 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GRK5P34947 590 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 PROK1P58294 105 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 ARF6P62330 175 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 HOXA4Q00056 320 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 TAF9Q16594 264 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 PCK2Q16822 640 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 CDONQ4KMG0 1287 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GLYATL3Q5SZD4 288 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 METAP1DQ6UB28 335 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GDPGP1Q6ZNW5 385 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 SCCPDHQ8NBX0 429 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 PROKR2Q8NFJ6 384 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 OR2AE1Q8NHA4 323 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 GNPDA2Q8TDQ7 276 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 UBE2FQ969M7 185 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 ASB9Q96DX5 294 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 DDOQ99489 341 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 RBM4BQ9BQ04 359 aaKnown RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 MUC13Q9H3R2 512 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 CNTD2Q9H8S5 307 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 RPUSD1Q9UJJ7 312 aaKnown RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 POMPQ9Y244 141 aa10.61□□□□□ -0.71
PTCH1-218ENST00000548945 CAB39Q9Y376 341 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-218ENST00000548945 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 hCG_1807616A0A1W2PRN6 198 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 A6NLC8 198 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 FCN3O75636 299 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 TIPRLO75663 272 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 GRPP07492 148 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 KRTAP10-3P60369 221 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 ACTR3P61158 418 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 DBPQ10586 325 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-218ENST00000548945 TRIM25Q14258 630 aaKnown RBP10.6□□□□□ -0.71
PTCH1-218ENST00000548945 MICBQ29980 383 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 TEX30Q5JUR7 227 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 SLC35F1Q5T1Q4 408 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 DCXRQ7Z4W1 244 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 ZDHHC21Q8IVQ6 265 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 RNF148Q8N7C7 305 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 LY6G5BQ8NDX9 201 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 OR56B2PQ8NGI1 322 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 KCNJ15Q99712 375 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 C16orf95Q9H693 158 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 MAGEL2Q9UJ55 1249 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 CDH10Q9Y6N8 788 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 COMMD3-BMI1R4GMX3 469 aa10.6□□□□□ -0.71
PTCH1-218ENST00000548945 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-218ENST00000548945 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 ANKRD30BLA7E2S9 258 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 KRT36O76013 467 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 FABP3P05413 133 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 FBP1P09467 338 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 RRM2P31350 389 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 FMO3P31513 532 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 PYCR1P32322 319 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 ENTPD1P49961 510 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 RIPK1Q13546 671 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 FLOT2Q14254 428 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 KPNB1Q14974 876 aaKnown RBP10.59□□□□□ -0.71
PTCH1-218ENST00000548945 PGBD2Q6P3X8 592 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 SLC36A1Q7Z2H8 476 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 VMO1Q7Z5L0 202 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 CMTM4Q8IZR5 234 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 LINC00471Q8N535 108 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 OR8S1Q8NH09 359 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 C12orf43Q96C57 262 aaKnown RBP10.59□□□□□ -0.71
PTCH1-218ENST00000548945 SP140LQ9H930 580 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 TCF7L1Q9HCS4 588 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms