RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MAP6Q96JE9 813 aa9.85□□□□□ -0.83
TRAFD1-205ENST00000548277 OR52D1Q9H346 318 aa9.85□□□□□ -0.83
TRAFD1-205ENST00000548277 DPAGT1Q9H3H5 408 aa9.85□□□□□ -0.83
TRAFD1-205ENST00000548277 PNRC2Q9NPJ4 139 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-205ENST00000548277 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
TRAFD1-205ENST00000548277 OR6C68A6NDL8 312 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 BTBD17A6NE02 478 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 ANKRD61A6NGH8 418 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 NDUFA2O43678 99 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 GMDSO60547 372 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 ZNF823P16415 610 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 RRM2P31350 389 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 SLC6A6P31641 620 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 MXRA7P84157 204 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 ECH1Q13011 328 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 KLRD1Q13241 179 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 IKZF1Q13422 519 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 PIGWQ7Z7B1 504 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 DEFB107AQ8IZN7 70 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 OR51L1Q8NGJ5 315 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 LRRC29Q8WV35 223 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 SPTSSAQ969W0 71 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 PPA2Q9H2U2 334 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 CENPMQ9NSP4 180 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 MRPL22Q9NWU5 206 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 CYB5R1Q9UHQ9 305 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 RPUSD1Q9UJJ7 312 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 ARL2BPQ9Y2Y0 163 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 SIGLEC9Q9Y336 463 aa9.84□□□□□ -0.83
TRAFD1-205ENST00000548277 BHLHE40O14503 412 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 ARPC3O15145 178 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 TBX1O43435 398 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 TFF1P04155 84 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 IFNGR2P38484 337 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 GSSP48637 474 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 TAF13Q15543 124 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 C2orf68Q2NKX9 166 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 CDONQ4KMG0 1287 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 SLC35E4Q6ICL7 350 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 C16orf89Q6UX73 402 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 LDLRAD3Q86YD5 345 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 ZDHHC21Q8IVQ6 265 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 CYB561A3Q8NBI2 242 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 OR56B2PQ8NGI1 322 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 OR8S1Q8NH09 359 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 GNPDA2Q8TDQ7 276 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 ZNRF4Q8WWF5 429 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 H1FXQ92522 213 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 SLC22A4Q9H015 551 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 PPP1R3EQ9H7J1 279 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 IL1RAPQ9NPH3 570 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 TRIM36Q9NQ86 728 aa9.83□□□□□ -0.84
TRAFD1-205ENST00000548277 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 RNASEK-C17orf49H0YIS7 233 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 DCTN3O75935 186 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 ECDO95905 644 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 LHBP01229 141 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 FBP1P09467 338 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 PSKH1P11801 424 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 TSPAN31Q12999 210 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 FAM189A2Q15884 450 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 LY6EQ16553 131 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 PCK2Q16822 640 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 MICBQ29980 383 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 WDR38Q5JTN6 314 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 PGBD2Q6P3X8 592 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 CYP2R1Q6VVX0 501 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 C1orf122Q6ZSJ8 110 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 ZBTB46Q86UZ6 589 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 C11orf53Q8IXP5 236 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 FAM216BQ8N7L0 139 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 LRTOMTQ8WZ04 291 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 COPS4Q9BT78 406 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 C16orf95Q9H693 158 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 SNTG1Q9NSN8 517 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 C14orf119Q9NWQ9 140 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 NDE1Q9NXR1 346 aa9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 CAB39Q9Y376 341 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 NOP16Q9Y3C1 178 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-205ENST00000548277 A0A1B0GVI7 797 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 MEIOCA2RUB1 952 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 ACOT8O14734 319 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 NPFFO15130 113 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 NDUFB3O43676 98 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 IDH3BO43837 385 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 ALX3O95076 343 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 PAHP00439 452 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 SPARCP09486 303 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 SELLP14151 372 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 EEF1B2P24534 225 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 PAX6P26367 422 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 CSNK2BP67870 215 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 SPATS1Q496A3 300 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 FBLN7Q53RD9 439 aa9.81□□□□□ -0.84
TRAFD1-205ENST00000548277 DCXRQ7Z4W1 244 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms