RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ENSAO43768 121 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 CDC40O60508 579 aaKnown RBP eCLIP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 SRP72O76094 671 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 IGHV3-48P01763 117 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 HPNP05981 417 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 HOXC4P09017 264 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 RSPH10BP0C881 870 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 PNMA6AP0CW24 399 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 IGKV1-13P0DP09 117 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 COX7A1P24310 79 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 PSMB6P28072 239 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 PRKAR2BP31323 418 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 KDELR2P33947 212 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 MAS1LP35410 378 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ARL2P36404 184 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 FABP6P51161 128 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 PLTPP55058 493 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 AP1S2P56377 157 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 UBE2G2P60604 165 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 DSTNP60981 165 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 TSPAN5P62079 268 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 RPL31P62899 125 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 C2orf80Q0P641 193 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ST3GAL4Q11206 333 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 TCP10Q12799 353 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 AQP6Q13520 282 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 DGCR6Q14129 220 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 TIMM50Q3ZCQ8 353 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 EOGTQ5NDL2 527 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ANKRD22Q5VYY1 191 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 THOC6Q86W42 341 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 CRLF3Q8IUI8 442 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 CDKL3Q8IVW4 592 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 FAM71AQ8IYT1 594 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 CDRT4Q8N9R6 151 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 OR52E2Q8NGJ4 325 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 OR6Q1Q8NGQ2 317 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 OR51A7Q8NH64 312 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 DOK4Q8TEW6 326 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 FAM3DQ96BQ1 224 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF689Q96CS4 500 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF514Q96K75 400 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 FCRL1Q96LA6 429 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ALS2CR12Q96Q35 445 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 TSNAXQ99598 290 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ARHGDIGQ99819 225 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF251Q9BRH9 671 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 BEX2Q9BXY8 128 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 SLC38A10Q9HBR0 1119 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 SH2D2AQ9NP31 389 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 TMEM9BQ9NQ34 198 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF581Q9P0T4 197 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF629Q9UEG4 869 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 KIF1BO60333 1816 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 CFAP47Q6ZTR5 3102 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 NCOR1O75376 2440 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 MUC6Q6W4X9 2439 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 A0A0A6YYD5 115 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 A0A0A6YYH2 397 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 A0A1B0GTI1 187 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 A0A1W2PNU3 283 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 A6NJ64 397 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 GOLGA8JA6NMD2 632 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 SYCE1LA8MT33 242 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 ANKRD63C9JTQ0 380 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 F8VP50 259 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 H0YHG0 523 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 H3BNH8 94 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 H7C423 109 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 K7EN84 100 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 hCG_2039718K7EN88 272 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 ITGB1BP1O14713 200 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PHF1O43189 567 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 GATCO43716 136 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 SLC16A7O60669 478 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 RDH16O75452 317 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 TNFAIP8O95379 198 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 GOLGA8HP0CJ92 632 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 GIMD1P0DJR0 217 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 TCP1P17987 556 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 P2RY4P51582 365 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 HCCSP53701 268 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 TAS2R39P59534 338 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 SEMG2Q02383 582 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 MAD2L1BPQ15013 274 aaPredicted RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 QPRTQ15274 297 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF239Q16600 458 aaKnown RBP3.19□□□□□ -1.9
SCAF11-210ENST00000547654 ZSCAN26Q16670 478 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 GSG1Q2KHT4 349 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PAGE3Q5JUK9 113 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 LCN12Q6JVE5 192 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 AHSA2Q719I0 299 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 NKAIN4Q8IVV8 208 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 PNKDQ8N490 385 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 NECAP1Q8NC96 275 aa3.19□□□□□ -1.9
SCAF11-210ENST00000547654 CHST4Q8NCG5 386 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms