RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 PDCD10Q9BUL8 212 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 NIPAL2Q9H841 368 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 KLK13Q9UKR3 277 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 NOP16Q9Y3C1 178 aaKnown RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 NCOR2Q9Y618 2525 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 SGCEO43556 437 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 HRH1P35367 487 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 CCL11P51671 97 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 RNASE10Q5GAN6 216 aaKnown RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ARMC10Q8N2F6 343 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 HYLS1Q96M11 299 aa11.19□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF436Q9C0F3 470 aaPredicted RBP11.19□□□□□ -0.62
SCAF11-209ENST00000547018 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 GSTZ1O43708 216 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-209ENST00000547018 EIF1BO60739 113 aaKnown RBP11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF780AO75290 641 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-209ENST00000547018 RGS11O94810 467 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 HLA-HP01893 362 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 CD79AP11912 226 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ICAM2P13598 275 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 DCAF12L2Q5VW00 463 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 TCTE3Q8IZS6 198 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ZBTB44Q8NCP5 570 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ZFAND1Q8TCF1 268 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 PSMF1Q92530 271 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 A0A1W2PNV4 684 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ICMTO60725 284 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 SERPINA7P05543 415 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 CLPPQ16740 277 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-209ENST00000547018 DCAF10Q5QP82 559 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 FOXRED2Q8IWF2 684 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 CLEC1AQ8NC01 280 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 PIGCQ92535 297 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 TMEM59Q9BXS4 323 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 IRF2BPLQ9H1B7 796 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 GPN1Q9HCN4 374 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-209ENST00000547018 TMEM9BQ9NQ34 198 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 DLL4Q9NR61 685 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 ADGRG4Q8IZF6 3080 aa11.18□□□□□ -0.62
SCAF11-209ENST00000547018 CIB4A0PJX0 185 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 LRRC3CA6NJW4 275 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 MRPL33O75394 65 aaKnown RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 SRSF10O75494 262 aaKnown RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 CASRP41180 1078 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 RBMS2Q15434 407 aaKnown RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 METTL11BQ5VVY1 283 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 FDX2Q6P4F2 183 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 PAQR4Q8N4S7 273 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 DYRK2Q92630 601 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 ZFP64Q9NPA5 681 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 C7orf66A4D0T2 115 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 HSPB6O14558 160 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 SLC22A5O76082 557 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 CSF1P09603 554 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 NPY4RP50391 375 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 ARPC4P59998 168 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 ENDOGQ14249 297 aaKnown RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 TAF9Q16594 264 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 SLC25A53Q5H9E4 307 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 LUZP4Q9P127 313 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 FLVCR1Q9Y5Y0 555 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 EEF1E1-BLOC1S5C9J1V9 151 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 RAB27BO00194 218 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 SULT1B1O43704 296 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 NDUFB6O95139 128 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 ADH6P28332 368 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 MTCP1P56278 107 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 TSPO2Q5TGU0 170 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 OR2V1Q8NHB1 315 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-209ENST00000547018 ACTR6Q9GZN1 396 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 KCNK7Q9Y2U2 307 aa11.17□□□□□ -0.62
SCAF11-209ENST00000547018 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 IGKV1-9A0A0C4DH69 117 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 TMEM82A0PJX8 343 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 B4E171 279 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 CTDSPLO15194 276 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 NKX2-8O15522 239 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 TPPPO94811 219 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 LPLP06858 475 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 OPRM1P35372 400 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 TSPAN7P41732 249 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 RAC3P60763 192 aa11.16□□□□□ -0.62
SCAF11-209ENST00000547018 SORDQ00796 357 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms