RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 USF3Q68DE3 2245 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 OR56B2PQ8NGI1 322 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 OR2G2Q8NGZ5 317 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 OR52N1Q8NH53 320 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 PPP1R14AQ96A00 147 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 ELMOD3Q96FG2 381 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 ZNF649Q9BS31 505 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 YTHDF1Q9BYJ9 559 aaKnown RBP11.73□□□□□ -0.53
PTCH1-213ENST00000546820 CXXC4Q9H2H0 198 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
PTCH1-213ENST00000546820 GPR84Q9NQS5 396 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 BABAM2Q9NXR7 383 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 SLC22A13Q9Y226 551 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 PDZD2O15018 2839 aa11.73□□□□□ -0.53
PTCH1-213ENST00000546820 A0A1B0GVI7 797 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 ZSCAN5BA6NJL1 495 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 MYL12BO14950 172 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 CD55P08174 381 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 UBCP0CG48 685 aaKnown RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 DAOP14920 347 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 CA6P23280 308 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 EEF1B2P24534 225 aaKnown RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 C21orf33P30042 268 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 MAGEB1P43366 347 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 TGM4P49221 684 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 SRP9P49458 86 aaKnown RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 RIPPLY1Q0D2K3 151 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 OR8G1Q15617 311 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 OR8B8Q15620 311 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 CCDC58Q4VC31 144 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 WDR38Q5JTN6 314 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 RNLSQ5VYX0 342 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 CLEC2AQ6UVW9 174 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 Q6ZR03 302 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 DOK3Q7L591 496 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 SEMA6DQ8NFY4 1073 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 RDH5Q92781 318 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 FAM71F1Q96KD3 344 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-213ENST00000546820 LYZL4Q96KX0 146 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 RHNO1Q9BSD3 238 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 SAP30LQ9HAJ7 183 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 ABCB9Q9NP78 766 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 FRRS1LQ9P0K9 344 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 CLEC2DQ9UHP7 191 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 ARID1AO14497 2285 aa11.72□□□□□ -0.53
PTCH1-213ENST00000546820 P2RY10O00398 339 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 SYT7O43581 403 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 RGS10O43665 173 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 DHRS3O75911 302 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 IGLV3-1P01715 115 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 ISG15P05161 165 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 ANOS1P23352 680 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 CRHBPP24387 322 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 PDLIM4P50479 330 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 PRSS12P56730 875 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 SLC35A2P78381 396 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 MVKQ03426 396 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 TESK1Q15569 626 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 ODF4Q2M2E3 257 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 Q5PR19 223 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 ZBTB37Q5TC79 503 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
PTCH1-213ENST00000546820 PRSS35Q8N3Z0 413 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 ZNF676Q8N7Q3 588 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 PLPP7Q8NBV4 271 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 GATAD2BQ8WXI9 593 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.53
PTCH1-213ENST00000546820 MND1Q9BWT6 205 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 CDCA4Q9BXL8 241 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 CCDC90BQ9GZT6 254 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 DLL4Q9NR61 685 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 C14orf119Q9NWQ9 140 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 MPC1Q9Y5U8 109 aa11.71□□□□□ -0.53
PTCH1-213ENST00000546820 TRBV2A0A0J9YWF9 115 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 TMEM212A6NML5 194 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 ANXA2P2A6NMY6 339 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 DHRS7CA6NNS2 312 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 LILRA1O75019 489 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 CST4P01036 141 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 HPXP02790 462 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 CRYBB2P43320 205 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 WNT4P56705 351 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 TAS2R43P59537 309 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 CARTPTQ16568 116 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 HFEQ30201 348 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms