RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 STK35Q8TDR2 534 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 OR2A5Q96R48 311 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 PRRT1Q99946 306 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 PRR14Q9BWN1 585 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 CACNA1AO00555 2505 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SDK2Q58EX2 2172 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 A0A1W2PR80 420 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ACOD1A6NK06 481 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM200CA6NKL6 621 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 HSPB2A8KAH6 182 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 K7ESF4 209 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 F2RP25116 425 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 CLDN6P56747 220 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 FOXK2Q01167 660 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SNTB1Q13884 538 aaKnown RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 HSPB2Q16082 182 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 GSG1Q2KHT4 349 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SPINK14Q6IE38 97 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 DLEU7Q6UYE1 221 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 LRRC56Q8IYG6 542 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SLC35G3Q8N808 338 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM99Q8N816 258 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 OR10G3Q8NGC4 313 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TMEM255BQ8WV15 326 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ARSGQ96EG1 525 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 JAM3Q9BX67 310 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 SLC25A37Q9NYZ2 338 aa7.74□□□□□ -1.17
CLIP1-218ENST00000545889 ERRFI1Q9UJM3 462 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-218ENST00000545889 TICRRQ7Z2Z1 1910 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PTPRQQ9UMZ3 2332 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 ACACBO00763 2458 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 A0A1W2PR77 199 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 FXYD1O00168 92 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SLC16A6O15403 523 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 XRCC2O43543 280 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 TECTAO75443 2155 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 CLN5O75503 358 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SC5DO75845 299 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 LYZL6O75951 148 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 GNB3P16520 340 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 CAMLGP49069 296 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 CSRP3P50461 194 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PPT1P50897 306 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 TAS2R46P59540 309 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 RAB11AP62491 216 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 UBE2IP63279 158 aaKnown RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 FABP9Q0Z7S8 132 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 MICBQ29980 383 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SLC22A24Q8N4F4 322 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 UBAC2Q8NBM4 344 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 OR2Z1Q8NG97 314 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 OR5B12Q96R08 314 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SLCO5A1Q9H2Y9 848 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PRO3102Q9H379 93 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 BCO1Q9HAY6 547 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SLC6A13Q9NSD5 602 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 TCRBV5S2A0A599 114 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 MRPS14O60783 128 aaKnown RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 HPP00738 406 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 NFYAP23511 347 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 HTR2AP28223 471 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 MEF2DQ14814 521 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PEA15Q15121 130 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 RHEBQ15382 184 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SHBQ15464 509 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SMIM21Q3B7S5 101 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 RNF212Q495C1 297 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 DCAF10Q5QP82 559 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 LPCAT3Q6P1A2 487 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 TIPARPQ7Z3E1 657 aaKnown RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SYNPRQ8TBG9 265 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 FOXB1Q99853 325 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 THAP7Q9BT49 309 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PRDM7Q9NQW5 492 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 GPR173Q9NS66 373 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 KIF25Q9UIL4 384 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 KLK4Q9Y5K2 254 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 TRBV4-1A0A0J9YWV2 114 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 KIR2DS1A0A191URI9 304 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 ANKUB1A6NFN9 424 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 NCR1O76036 304 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SMIM6P0DI80 62 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 NQO2P16083 231 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 KIR2DS4P43632 304 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 RAE1P78406 368 aaKnown RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 KIR2DS1Q14954 304 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 ZIC1Q15915 447 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 DNAJC22Q8N4W6 341 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 ARIH2OSQ8N7S6 290 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 OR51F2Q8NH61 342 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 HMGCLL1Q8TB92 370 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 DNASE2BQ8WZ79 361 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 CNRIP1Q96F85 164 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-218ENST00000545889 PLK3Q9H4B4 646 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 SLCO1C1Q9NYB5 712 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 NTNG1Q9Y2I2 539 aa7.73□□□□□ -1.17
CLIP1-218ENST00000545889 MYO18BQ8IUG5 2567 aa7.72□□□□□ -1.17
CLIP1-218ENST00000545889 A0A087WV62 115 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms