RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PRPSAP2O60256 369 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 SMPD2O60906 423 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 BCAS2O75934 225 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 GLSO94925 669 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 UGT2B7P16662 529 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ZNF24P17028 368 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 CXCR2P25025 360 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 OPRM1P35372 400 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 SLC26A3P40879 764 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 NSG1P42857 185 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 VDAC2P45880 294 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 NDUFA8P51970 172 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 EMP2P54851 167 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 CDH6P55285 790 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DLX1P56177 255 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 VSX2P58304 361 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DMTNQ08495 405 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DPYSL2Q16555 572 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DEFB110Q30KQ9 67 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 GPRC6AQ5T6X5 926 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 PRMT9Q6P2P2 845 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 KDELC1Q6UW63 502 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 NLRP9Q7RTR0 991 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 PAQR7Q86WK9 346 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 PHF13Q86YI8 300 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 SLC13A5Q86YT5 568 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 CRLF3Q8IUI8 442 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 RDH10Q8IZV5 341 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 LIX1Q8N485 282 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 PNPT1Q8TCS8 783 aaKnown RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 RNASE6Q93091 150 aaKnown RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ASB9Q96DX5 294 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 C12orf66Q96MD2 445 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ZNF396Q96N95 335 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 TSGA13Q96PP4 275 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 GSDMAQ96QA5 445 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 PEBP4Q96S96 227 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 TUBGCP2Q9BSJ2 902 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 SNRNP25Q9BV90 132 aaKnown RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ACAT2Q9BWD1 397 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 POLR1EQ9GZS1 481 aaKnown RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ACTR8Q9H981 624 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 IMP3Q9NV31 184 aaKnown RBP2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DNAJC12Q9UKB3 198 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 ALG6Q9Y672 507 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 MED12Q93074 2177 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DYSFO75923 2080 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 ALPK2Q86TB3 2170 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 IGLV11-55A0A075B6I3 123 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 A0A0J9YY10 115 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 FAM230AA0A1W2PPH8 454 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 GABRR3A8MPY1 467 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 DFFAO00273 331 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 BCKDKO14874 412 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 UGT1A9O60656 530 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 DNAJB6O75190 326 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SUPT3HO75486 399 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 STATHP02808 62 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 PCK1P35558 622 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SYKP43405 635 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 PRLHRP49683 370 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 MLF1P58340 268 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 RELAQ04206 551 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 XRCC4Q13426 336 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 GRB7Q14451 532 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 MESDQ14696 234 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 EXOC3L4Q17RC7 722 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CNSTQ6PJW8 725 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 TPRA1Q86W33 373 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 TRAPPC5Q8IUR0 188 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 KIR3DL3Q8N743 410 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SGMS2Q8NHU3 365 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 LINC01560Q8TB33 94 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SLC13A3Q8WWT9 602 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 LCN9Q8WX39 176 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CCDC47Q96A33 483 aaKnown RBP2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CSPG4P5Q96PW8 444 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CYTH2Q99418 400 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SLC6A7Q99884 636 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 UTP23Q9BRU9 249 aaKnown RBP2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CRACR2AQ9BSW2 395 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 NAT9Q9BTE0 207 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 REG4Q9BYZ8 158 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SLC7A5P2Q9GIP4 190 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 XKR8Q9H6D3 395 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 UGT1A7Q9HAW7 530 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 UGT1A10Q9HAW8 530 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 UGT1A8Q9HAW9 530 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 LRTM1Q9HBL6 345 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 NT5MQ9NPB1 228 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 C14orf105Q9NVL8 296 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 RBM22Q9NW64 420 aaKnown RBP eCLIP2.18□□□□□ -2.061e-8■■■□□ 18.1
SNHG1-224ENST00000545688 ZNF226Q9NYT6 803 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 ZNF629Q9UEG4 869 aaPredicted RBP2.18□□□□□ -2.06
SNHG1-224ENST00000545688 HEBP2Q9Y5Z4 205 aa2.18□□□□□ -2.06
SNHG1-224ENST00000545688 SNRNP200O75643 2136 aaKnown RBP2.18□□□□□ -2.06
SNHG1-224ENST00000545688 CR1P17927 2039 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms