RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TRAP1Q12931 704 aaKnown RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 ECH1Q13011 328 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 DGUOKQ16854 277 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 PLA1AQ53H76 456 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 LRRC10Q5BKY1 277 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 TCTEX1D4Q5JR98 221 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 GLYATL3Q5SZD4 288 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 ATPAF1Q5TC12 328 aaPredicted RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 STUMQ69YW2 141 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 TBPL2Q6SJ96 375 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 WDR82Q6UXN9 313 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 RNF144BQ7Z419 303 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 TSEN54Q7Z6J9 526 aaKnown RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 TMEM219Q86XT9 240 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 DYNAPQ8N1N2 210 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 LNX2Q8N448 690 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 OR56B2PQ8NGI1 322 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 DUS3LQ96G46 650 aaKnown RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 PRRC1Q96M27 445 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 PITX2Q99697 317 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 RNPEPL1Q9HAU8 725 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 ELL3Q9HB65 397 aaPredicted RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 MRPL15Q9P015 296 aaKnown RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 RHCGQ9UBD6 479 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 BAG5Q9UL15 447 aa7.58□□□□□ -1.2
CHD4-212ENST00000545083 SF3B6Q9Y3B4 125 aaKnown RBP7.58□□□□□ -1.2
CHD4-212ENST00000545083 A0A087WUU8 490 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 J3KTA2 159 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 BHLHE40O14503 412 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 FFAR1O14842 300 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 PF4P02776 101 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 FAHP16930 419 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 SDHAP31040 664 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 GMFBP60983 142 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 GABPB1Q06547 395 aaPredicted RBP7.57□□□□□ -1.2
CHD4-212ENST00000545083 CNN3Q15417 329 aaKnown RBP7.57□□□□□ -1.2
CHD4-212ENST00000545083 ZBED5Q49AG3 693 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 ZNF788Q6ZQV5 615 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 CCDC121Q6ZUS5 278 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 DTX3Q8N9I9 347 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 SLC26A10Q8NG04 563 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 OR5AU1Q8NGC0 362 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 OR9Q1Q8NGQ5 310 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 GAFA1Q96PS6 74 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 ATF6BQ99941 703 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 WDR13Q9H1Z4 485 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 MUC13Q9H3R2 512 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 PPP1R3EQ9H7J1 279 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 NRIP3Q9NQ35 241 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 SNTG1Q9NSN8 517 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 C14orf119Q9NWQ9 140 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 ZNF391Q9UJN7 358 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 TCF19Q9Y242 345 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 SNX13Q9Y5W8 968 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
CHD4-212ENST00000545083 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 TRBV23-1A0A0A0MS06 115 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 A0A1W2PQ09 198 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 A6NDX4 124 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 M0R135 149 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 PTP4A3O75365 173 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 PEX14O75381 377 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 NHLRC4P0CG21 123 aaPredicted RBP7.56□□□□□ -1.2
CHD4-212ENST00000545083 NDUFB7P17568 137 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 TPTEP56180 551 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 FXYD6P3P58550 94 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 BLCAPP62952 87 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 NFYCQ13952 458 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 RFX4Q33E94 735 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 CYBRD1Q53TN4 286 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 RABL3Q5HYI8 236 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 GPR139Q6DWJ6 353 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 TMPRSS11FQ6ZWK6 438 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 MBOAT2Q6ZWT7 520 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 DPY19L4Q7Z388 723 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 LHFPL4Q7Z7J7 247 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 MKXQ8IYA7 352 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 OFCC1Q8IZS5 231 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 OR6V1Q8N148 313 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 MREGQ8N565 214 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 OR1M1Q8NGA1 313 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 C12orf43Q96C57 262 aaKnown RBP7.56□□□□□ -1.2
CHD4-212ENST00000545083 ZNF799Q96GE5 643 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 MAP6Q96JE9 813 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 CCDC28BQ9BUN5 200 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 PRSS22Q9GZN4 317 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 SRA1Q9HD15 236 aaKnown RBP7.56□□□□□ -1.2
CHD4-212ENST00000545083 ARGLU1Q9NWB6 273 aaPredicted RBP7.56□□□□□ -1.2
CHD4-212ENST00000545083 HAO2Q9NYQ3 351 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 SLC25A10Q9UBX3 287 aaPredicted RBP7.56□□□□□ -1.2
CHD4-212ENST00000545083 B9D1Q9UPM9 204 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 IER3IP1Q9Y5U9 82 aa7.56□□□□□ -1.2
CHD4-212ENST00000545083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.55□□□□□ -1.2
CHD4-212ENST00000545083 NKX6-3A6NJ46 265 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 VGLL3A8MV65 326 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 H0YAE9 185 aa7.55□□□□□ -1.2
CHD4-212ENST00000545083 CDIPTO14735 213 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms