RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	C6orf47	O95873	294 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	CHRNG	P07510	517 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	FGF4	P08620	206 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	NUDT17	P0C025	328 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	MYL2	P10916	166 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	FCGR1A	P12314	374 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZNF35	P13682	527 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZNF43	P17038	809 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	PRPS1L1	P21108	318 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ALDH3B1	P43353	468 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ATP4B	P51164	291 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	FUT6	P51993	359 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	CBX1	P83916	185 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	GNA13	Q14344	377 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	TAF13	Q15543	124 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR7A5	Q15622	319 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	MAPK14	Q16539	360 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	KRTAP15-1	Q3LI76	137 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	NIPAL3	Q6P499	406 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	EMB	Q6PCB8	327 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	C16orf87	Q6PH81	154 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZNF440	Q8IYI8	595 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	GPR137C	Q8N3F9	429 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	KLHDC1	Q8N7A1	406 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	SIGLECL1	Q8N7X8	197 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR5D16	Q8NGK9	328 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	CLHC1	Q8NHS4	586 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	MIPOL1	Q8TD10	442 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	C22orf15	Q8WYQ4	148 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	RAB8B	Q92930	207 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	TIMD4	Q96H15	378 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	PPP3R2	Q96LZ3	170 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	SPAG8	Q99932	426 aa	Predicted RBP	5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	MTHFD2L	Q9H903	347 aa	Predicted RBP	5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZDHHC18	Q9NUE0	388 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	B3GNT2	Q9NY97	397 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	PLEK2	Q9NYT0	353 aa		5.06	□□□□□ -1.6
CPSF7-222	ENST00000544585	WDR91	A4D1P6	747 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZNF99	A8MXY4	864 aa	Predicted RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585		G3V2L1	256 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CCL24	O00175	119 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	LSM1	O15116	133 aa	Known RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ATP8B1	O43520	1251 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	FOXH1	O75593	365 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR6A2	O95222	327 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	DIRAS3	O95661	229 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	IGHV2-5	P01817	119 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CRYBA1	P05813	215 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	TFPT	P0C1Z6	253 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	LINC00032	P0C843	101 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR12D1	P0DN82	309 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	PITPNB	P48739	271 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	P2RY4	P51582	365 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CLDN17	P56750	224 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	SST	P61278	116 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	COPZ1	P61923	177 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	RPL38	P63173	70 aa	Known RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	HBA1	P69905	142 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	GAGE5	Q13069	117 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	GAGE6	Q13070	117 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	C1D	Q13901	141 aa	Known RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	GSG1	Q2KHT4	349 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CCDC153	Q494R4	210 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CLEC6A	Q6EIG7	209 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ZYG11A	Q6WRX3	759 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	SYT10	Q6XYQ8	523 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	C17orf107	Q6ZR85	190 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	KCTD8	Q6ZWB6	473 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	SLC16A9	Q7RTY1	509 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	NET1	Q7Z628	596 aa	Predicted RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	MDP1	Q86V88	176 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	MAPKAPK5-AS1	Q8N8E1	139 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	MNS1	Q8NEH6	495 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR2T11	Q8NH01	316 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	MFSD8	Q8NHS3	518 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	TMIGD2	Q96BF3	282 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ROPN1L	Q96C74	230 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	LRR1	Q96L50	414 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OXGR1	Q96P68	337 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ALKBH3	Q96Q83	286 aa	Predicted RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	CCT8L2	Q96SF2	557 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	ASCL2	Q99929	193 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	DPY30	Q9C005	99 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR51I1	Q9H343	314 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	BEX1	Q9HBH7	125 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	OPN4	Q9UHM6	478 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	DNAJC15	Q9Y5T4	150 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	AUP1	Q9Y679	476 aa		5.05	□□□□□ -1.6
CPSF7-222	ENST00000544585	IGLV5-45	A0A087WSX0	123 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	IGHV1-69-2	A0A0G2JMI3	117 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	LOC100996750	A0A140TA64	210 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	LOC102725191	A0A1B0GVB3	256 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	EXOC1L	A0A1B0GW35	172 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	DNAJC9-AS1	A6NH13	148 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	CLDN25	C9JDP6	229 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	AKAP8	O43823	692 aa	Known RBP	5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	OR2T1	O43869	369 aa		5.04	□□□□□ -1.6
CPSF7-222	ENST00000544585	XPNPEP2	O43895	674 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms