RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 HIST1H2ABP04908 130 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 BCHEP06276 602 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 CST2P09228 141 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HNRNPCL4P0DMR1 293 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 CD200P41217 278 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 DAP3P51398 398 aaKnown RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF133P52736 654 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 CLNS1AP54105 237 aaKnown RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 RAD23AP54725 363 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ERVK-25P63136 954 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 MELKQ14680 651 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SGCAQ16586 387 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 C6orf136Q5SQH8 315 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 FBXW12Q6X9E4 464 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HIST3H2AQ7L7L0 130 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SLC36A1Q7Z2H8 476 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 BCDIN3DQ7Z5W3 292 aaKnown RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SATL1Q86VE3 508 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SLC30A8Q8IWU4 369 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 OR5AS1Q8N127 324 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 CLIP4Q8N3C7 705 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 CCDC63Q8NA47 563 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 PCYOX1LQ8NBM8 494 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 LY6G5BQ8NDX9 201 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 OR5D13Q8NGL4 314 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 FNDC8Q8TC99 324 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 NABP1Q96AH0 204 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 TESCQ96BS2 214 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 PANX1Q96RD7 426 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF347Q96SE7 839 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ECSITQ9BQ95 431 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 MRPL13Q9BYD1 178 aaKnown RBP3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SLC22A4Q9H015 551 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 WNT5BQ9H1J7 359 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 MUC13Q9H3R2 512 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 EVA1AQ9H8M9 152 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM27Q9HBJ8 222 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SLCO1B3Q9NPD5 702 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ABCB10Q9NRK6 738 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 C20orf141Q9NUB4 165 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM100Q9NV29 134 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ASIC5Q9NY37 505 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 NINJ2Q9NZG7 142 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 RNF7Q9UBF6 113 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 BTNL2Q9UIR0 455 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF229Q9UJW7 825 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 RAB21Q9UL25 225 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 AURKCQ9UQB9 309 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
SNHG1-220ENST00000544550 TANC2Q9HCD6 1990 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A0B4J2E0 115 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1B0GWJ7 208 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1B0GX12 115 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PRD5 423 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PRF3 423 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1W2PRM7 423 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 WDR91A4D1P6 747 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 SAC3D1A6NKF1 404 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 VGLL3A8MV65 326 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 IQCF6A8MYZ5 107 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 LRRN3E7EW58 273 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 F5H5P2 479 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 POLR3GO15318 223 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MLNRO43193 412 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 NDUFB3O43676 98 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 SLC25A17O43808 307 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CHST1O43916 411 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 DOK2O60496 412 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 FMO6PO60774 539 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 IGF2P01344 180 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 GYPAP02724 150 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CPA3P15088 417 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ACADSP16219 412 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 LAP3P28838 519 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CDAP32320 146 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 GRK5P34947 590 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 PMELP40967 661 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 HTR5AP47898 357 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 VEGFCP49767 419 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 GSK3BP49841 420 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 BMXP51813 675 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MRPS25P82663 173 aaKnown RBP3.27□□□□□ -1.89
SNHG1-220ENST00000544550 HOXC5Q00444 222 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 EMX2Q04743 252 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MZT1Q08AG7 82 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 SCRN3Q0VDG4 424 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 ECH1Q13011 328 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CASP8Q14790 479 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 MICBQ29980 383 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 UGT3A2Q3SY77 523 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 LRRC10Q5BKY1 277 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CLEC12AQ5QGZ9 265 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 OR2T2Q6IF00 324 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 WDR93Q6P2C0 686 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CCDC121Q6ZUS5 278 aa3.27□□□□□ -1.89
SNHG1-220ENST00000544550 CENPVQ7Z7K6 275 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms