RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ASXL3Q9C0F0 2248 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SPAARA0A1B0GVQ0 90 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SPOPO43791 374 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 EIF3GO75821 320 aaKnown RBP eCLIP2.56□□□□□ -2
SCFD1-207ENST00000544052 CLPXO76031 633 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 CSTAP01040 98 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 HLA-DRAP01903 254 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TNNC2P02585 160 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 OTX1P32242 354 aaPredicted RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 BMI1P35226 326 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 NDUFA8P51970 172 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 CLDN8P56748 225 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 MAP3K7CLP57077 242 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 NUP107P57740 925 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 IRF8Q02556 426 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ECH1Q13011 328 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 C9orf135Q5VTT2 229 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TMEM53Q6P2H8 277 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 LINC00173Q6ZV60 143 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SPAG16Q8N0X2 631 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SPERTQ8NA61 448 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 DEFB124Q8NES8 71 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TSTD1Q8NFU3 115 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 OR4A4PQ8NGN8 299 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ZNF502Q8TBZ5 544 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 WFDC5Q8TCV5 224 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 CXorf40AQ8TE69 158 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TMEM54Q969K7 222 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ISG20Q96AZ6 181 aaKnown RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 GABRG3Q99928 467 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 NRIP2Q9BQI9 281 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 XKR8Q9H6D3 395 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SLCO1B3Q9NPD5 702 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ZNHIT6Q9NWK9 470 aaKnown RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 RAB23Q9ULC3 237 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 COMMD3-BMI1R4GMX3 469 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 RP1P56715 2156 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 PTPRQQ9UMZ3 2332 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 FASNP49327 2511 aaKnown RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 TRPM6Q9BX84 2022 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 A0A0G2JN53 185 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 A0A1B0GVI7 797 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 PVALEFA0A1B0GWK0 134 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 EEDO75530 441 aaKnown RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 OTCP00480 354 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 GKN3PP0CG01 181 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 RRM2P31350 389 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 GCLMP48507 274 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 FGF8P55075 233 aaPredicted RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 TNNC1P63316 161 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ZNF92Q03936 586 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 C22orf42Q6IC83 251 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 C6orf89Q6UWU4 347 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TPGS1Q6ZTW0 290 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 MMAAQ8IVH4 418 aaKnown RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 CMTM1Q8IZ96 169 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 PDIK1LQ8N165 341 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 OR4F15Q8NGB8 312 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 RHEBL1Q8TAI7 183 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 LRRC58Q96CX6 371 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 SMARCD1Q96GM5 515 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 IMMP1LQ96LU5 166 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 KCTD14Q9BQ13 255 aaPredicted RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 STMN4Q9H169 189 aaPredicted RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 DMAP1Q9NPF5 467 aaPredicted RBP2.56□□□□□ -2
SCFD1-207ENST00000544052 GNPTGQ9UJJ9 305 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 TBC1D24Q9ULP9 559 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 ING4Q9UNL4 249 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 KNTC1P50748 2209 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 NOTCH3Q9UM47 2321 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 ZFC3H1O60293 1989 aaKnown RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 GJE1A6NN92 205 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 DYNC1I1O14576 645 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 POLR3GO15318 223 aaPredicted RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 CHST1O43916 411 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 APODP05090 189 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 SERPINA5P05154 406 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 ERCC1P07992 297 aaPredicted RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 CSF3P09919 207 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 HLA-EP13747 358 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 CSRP1P21291 193 aaKnown RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 UQCRFS1P47985 274 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 CLDN6P56747 220 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 RPS21P63220 83 aaKnown RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 AQP6Q13520 282 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 IL18Q14116 193 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 GUCA2BQ16661 112 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 TSEN15Q8WW01 171 aaKnown RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 CAPSLQ8WWF8 208 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 MYDGFQ969H8 173 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 OR5B12Q96R08 314 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 BBS2Q9BXC9 721 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 MMP26Q9NRE1 261 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 TRAPPC4Q9Y296 219 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 STK38LQ9Y2H1 464 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 HEBP2Q9Y5Z4 205 aa2.55□□□□□ -2
SCFD1-207ENST00000544052 URB1O60287 2271 aaKnown RBP2.55□□□□□ -2
SCFD1-207ENST00000544052 CDC7O00311 574 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 TGM6O95932 706 aa2.54□□□□□ -2
SCFD1-207ENST00000544052 INSP01308 110 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms