RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CSNK2A3	Q8NEV1	391 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR8G5	Q8NG78	346 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR13C3	Q8NGS6	347 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	TSEN15	Q8WW01	171 aa	Known RBP	8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	PIGC	Q92535	297 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	FCGR1B	Q92637	280 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	SMIM19	Q96E16	107 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	MGLL	Q99685	303 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	PAPOLG	Q9BWT3	736 aa	Known RBP	8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	LIME1	Q9H400	295 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLEKHA1	Q9HB21	404 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	MSL2	Q9HCI7	577 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	CYSLTR2	Q9NS75	346 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMEM100	Q9NV29	134 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	DHDH	Q9UQ10	334 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	PIGL	Q9Y2B2	252 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLEKHA6	Q9Y2H5	1048 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF281	Q9Y2X9	895 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	LSM2	Q9Y333	95 aa	Known RBP	8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	TRIM64	A6NGJ6	449 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545		A6NIN4	97 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	IQCF6	A8MYZ5	107 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	INMT	O95050	263 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CD8A	P01732	235 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	ISG15	P05161	165 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	ERCC1	P07992	297 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	OCM2	P0CE71	109 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	OCM	P0CE72	109 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	FAH	P16930	419 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CA6	P23280	308 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	DNASE1	P24855	282 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	SOX2	P48431	317 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	ACSM1	Q08AH1	577 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	MLLT11	Q13015	90 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	TST	Q16762	297 aa	Known RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	SWI5	Q1ZZU3	235 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	UBE2U	Q5VVX9	321 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	DTX2	Q86UW9	622 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCDC54	Q8NEL0	328 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR2Z1	Q8NG97	314 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR14K1	Q8NGZ2	314 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR13G1	Q8NGZ3	307 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	GPR148	Q8TDV2	347 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	GTF3A	Q92664	365 aa	Known RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	PIGT	Q969N2	578 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMEM203	Q969S6	136 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	HIST1H2AA	Q96QV6	131 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	TRAF4	Q9BUZ4	470 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMED9	Q9BVK6	235 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CACNG6	Q9BXT2	260 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	TPK1	Q9H3S4	243 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	MS4A5	Q9H3V2	200 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CXorf56	Q9H5V9	222 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	ISYNA1	Q9NPH2	558 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	CGGBP1	Q9UFW8	167 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	ENPP5	Q9UJA9	477 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	FBXO9	Q9UK97	447 aa	Predicted RBP	8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	RHBDD3	Q9Y3P4	386 aa		8.68	□□□□□ -1.02
CPSF7-221	ENST00000543545	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF816-ZNF321P	A0A0X1KG74	233 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	LOC390937	A0A1W2PQ73	354 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ANXA2P2	A6NMY6	339 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF850	A8MQ14	1090 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	PLPP2	O43688	288 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	LILRA1	O75019	489 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	SERPINA3	P01011	423 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	IGLV3-1	P01715	115 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	RAF1	P04049	648 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	HLA-DPB1	P04440	258 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	PCMT1	P22061	227 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCL1	P22362	96 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	TNFSF4	P23510	183 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ACKR3	P25106	362 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	CDKN1A	P38936	164 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	GPR50	Q13585	617 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	TPBG	Q13641	420 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	DOC2B	Q14184	412 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR8G1	Q15617	311 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR8B8	Q15620	311 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	YIF1B	Q5BJH7	314 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMEM255A	Q5JRV8	349 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	MOB3C	Q70IA8	216 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZCCHC24	Q8N2G6	241 aa	Known RBP	8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	MS4A15	Q8N5U1	240 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR51A4	Q8NGJ6	313 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR10AC1	Q8NH08	325 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR8S1	Q8NH09	359 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ITFG2	Q969R8	447 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	FGGY	Q96C11	551 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	OPALIN	Q96PE5	141 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	SLC22A4	Q9H015	551 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	RAB1B	Q9H0U4	201 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	DECR2	Q9NUI1	292 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	MRPL15	Q9P015	296 aa	Known RBP	8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZDHHC8	Q9ULC8	765 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	NOP16	Q9Y3C1	178 aa	Known RBP	8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545		V9GYS6	101 aa		8.67	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZSCAN5B	A6NJL1	495 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	C17orf100	A8MU93	164 aa		8.66	□□□□□ -1.02
CPSF7-221	ENST00000543545	LMX1B	O60663	402 aa		8.66	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms