RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 RAP2AP10114 183 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 SLC2A1P11166 492 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 CALB2P22676 271 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 GNALP38405 381 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 PDCD1Q15116 288 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 SFRP4Q6FHJ7 346 aaPredicted RBP10.91□□□□□ -0.66
RTN3-212ENST00000543123 C16orf87Q6PH81 154 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 CD300LDQ6UXZ3 194 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 SPATC1Q76KD6 591 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 SHFQ7M4L6 423 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
RTN3-212ENST00000543123 C19orf18Q8NEA5 215 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 OR10G2Q8NGC3 310 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 ZNRF4Q8WWF5 429 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 GATAD2BQ8WXI9 593 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 NSL1Q96IY1 281 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 FAM71F1Q96KD3 344 aaPredicted RBP10.91□□□□□ -0.66
RTN3-212ENST00000543123 PCGF1Q9BSM1 259 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 OR10A2Q9H208 303 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 ABCB9Q9NP78 766 aa10.91□□□□□ -0.66
RTN3-212ENST00000543123 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 ANXA2P2A6NMY6 339 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 SRRM5B3KS81 715 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.66
RTN3-212ENST00000543123 CRYBA1P05813 215 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
RTN3-212ENST00000543123 GSTT1P30711 240 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 CFHR2P36980 270 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
RTN3-212ENST00000543123 MICBQ29980 383 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 BRD3OSQ6XYD6 125 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 DPY19L4Q7Z388 723 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.9□□□□□ -0.66
RTN3-212ENST00000543123 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 OR6N2Q8NGY6 317 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 OTULINQ96BN8 352 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 ASB9Q96DX5 294 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 SLITRK2Q9H156 845 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 PRDM13Q9H4Q3 707 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 MARCH7Q9H992 704 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
RTN3-212ENST00000543123 GLCEO94923 617 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 GYPAP02724 150 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 H2BFMP0C1H6 154 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 CLUP10909 449 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 PSKH1P11801 424 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 GYS2P54840 703 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 RPL15P61313 204 aaKnown RBP10.89□□□□□ -0.67
RTN3-212ENST00000543123 FAM3AP98173 230 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 IL5RAQ01344 420 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
RTN3-212ENST00000543123 DEFB112Q30KQ8 113 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 ZNF454Q8N9F8 522 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 OR4F5Q8NH21 305 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 SSMEM1Q8WWF3 244 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 TMIGD2Q96BF3 282 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 C12orf43Q96C57 262 aaKnown RBP10.89□□□□□ -0.67
RTN3-212ENST00000543123 CCDC124Q96CT7 223 aaKnown RBP10.89□□□□□ -0.67
RTN3-212ENST00000543123 PGAM5Q96HS1 289 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 WDFY2Q96P53 400 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 FEVQ99581 238 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 MICU1Q9BPX6 476 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 ABHD6Q9BV23 337 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 PAPOLGQ9BWT3 736 aaKnown RBP10.89□□□□□ -0.67
RTN3-212ENST00000543123 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 POMT1Q9Y6A1 747 aa10.89□□□□□ -0.67
RTN3-212ENST00000543123 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-212ENST00000543123 GNGT2O14610 69 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
RTN3-212ENST00000543123 GPR37O15354 613 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 CST1P01037 141 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 LHBP01229 141 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 SFTPBP07988 381 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
RTN3-212ENST00000543123 OPRL1P41146 370 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 GSK3AP49840 483 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
RTN3-212ENST00000543123 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 LINC01590Q5TEZ4 76 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 FAM90A1Q86YD7 464 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
RTN3-212ENST00000543123 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms