RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TMEM104Q8NE00 496 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 OR5L2Q8NGL0 311 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 ZNF75AQ96N20 296 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 NOSIPQ9Y314 301 aaKnown RBP13.06□□□□□ -0.32
DDX55-209ENST00000542286 TRAV14DV4A0A0A6YYC5 116 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 SGCEO43556 437 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 ACAA1P09110 424 aaPredicted RBP13.06□□□□□ -0.32
DDX55-209ENST00000542286 CLDN17P56750 224 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 PCOLCEQ15113 449 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 SGCAQ16586 387 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 LRRC37A5PQ49AS3 106 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 ZNF813Q6ZN06 617 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 THAP6Q8TBB0 222 aa13.06□□□□□ -0.32
DDX55-209ENST00000542286 ZNF837Q96EG3 531 aaPredicted RBP13.06□□□□□ -0.32
DDX55-209ENST00000542286 SULT2B1O00204 365 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 ZNF208O43345 1280 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 KCNAB3O43448 404 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 IFNA4P05014 189 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 CRYBA1P05813 215 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 ADCYAP1P18509 176 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 HSD11B1P28845 292 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
DDX55-209ENST00000542286 TAF13Q15543 124 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 MPPED2Q15777 294 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 PCK2Q16822 640 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
DDX55-209ENST00000542286 C3orf33Q6P1S2 294 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 KLHL24Q6TFL4 600 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 OR2W3Q7Z3T1 314 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 FJX1Q86VR8 437 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 MRGPRX4Q96LA9 322 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
DDX55-209ENST00000542286 C1orf198Q9H425 327 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 PCDHB10Q9UN67 800 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 ZNF43P17038 809 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 HAAOP46952 286 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 UQCC3Q6UW78 93 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 NOXO1Q8NFA2 376 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 OR8B12Q8NGG6 310 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 OR6N1Q8NGY5 312 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 PDCD10Q9BUL8 212 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 DUSP23Q9BVJ7 150 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 SELENOIQ9C0D9 397 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 GPR84Q9NQS5 396 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 DOCK7Q96N67 2140 aa13.05□□□□□ -0.32
DDX55-209ENST00000542286 DSPP15924 2871 aaKnown RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 A0A0D9SG52 128 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 A0A0G2JMM0 328 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 A0A1B0GTI1 187 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 A0A1W2PPB8 328 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 KANTRA0A1W2PQU2 76 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 A0A1W2PRS3 328 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 KIR3DP1A8MWS1 328 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 RAB27BO00194 218 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 LDLRAD4O15165 306 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 BDKRB2P30411 391 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 OR3A4PP47883 348 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 PPIAP62937 165 aaKnown RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 CDNFQ49AH0 187 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 BEX5Q5H9J7 111 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 RAET1LQ5VY80 246 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 DHRS7BQ6IAN0 325 aaPredicted RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 LYPD6Q86Y78 171 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 SEC22AQ96IW7 307 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 GSN-AS1Q9NRJ2 163 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 HSPB2A8KAH6 182 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 IGHG1P01857 330 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 MMP16P51512 607 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 HSPB2Q16082 182 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 AWAT2Q6E213 333 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 JMJD6Q6NYC1 403 aaPredicted RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 ZNF704Q6ZNC4 412 aaPredicted RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 ZNF471Q9BX82 626 aaPredicted RBP13.04□□□□□ -0.32
DDX55-209ENST00000542286 FAM117AQ9C073 453 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 ZNF160Q9HCG1 818 aa13.04□□□□□ -0.32
DDX55-209ENST00000542286 F5H5K5 113 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 CYB5AP00167 134 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 F12P00748 615 aaPredicted RBP13.03□□□□□ -0.32
DDX55-209ENST00000542286 DBHP09172 617 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ZNF806P0C7X5 589 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 FSTP19883 344 aa13.03□□□□□ -0.32
DDX55-209ENST00000542286 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms