RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MYH3P11055 1940 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CIB4A0PJX0 185 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TMEM213A2RRL7 107 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RNF212BA8MTL3 300 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 A8MWP6 167 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KLRC4-KLRK1H3BQV0 150 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 M0R3G1 203 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 HAS3O00219 553 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 WWP2O00308 870 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ARPC3O15145 178 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 SLC16A4O15374 487 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ZNF208O43345 1280 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KDELR3O43731 214 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR1F1O43749 312 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DUX1O43812 170 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 LYPLA1O75608 230 aaPredicted RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 OR2J2O76002 312 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 B3GAT3O94766 335 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 VAMP5O95183 116 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CTDNEP1O95476 244 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CLDN9O95484 217 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 AP2A1O95782 977 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 FADS2O95864 444 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 IGSF6O95976 241 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 IGHV2-5P01817 119 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RPN2P04844 631 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 C8GP07360 202 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ERCC1P07992 297 aaPredicted RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 HTR1AP08908 422 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CPN1P15169 458 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 UCHL3P15374 230 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 KCNE1P15382 129 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TBXA2RP21731 343 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 BGNP21810 368 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TUBG1P23258 451 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 S100A2P29034 98 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 IFNGR2P38484 337 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MAGEA12P43365 314 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 IDH2P48735 452 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 EMDP50402 254 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RORCP51449 518 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PRELPP51888 382 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PLA2G16P53816 162 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DSCR10P59022 87 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 GABARAPL2P60520 117 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RAB11AP62491 216 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RPS6P62753 249 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 RPS27AP62979 156 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 PPP3R1P63098 170 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 EIF5AP63241 154 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 SRPXP78539 464 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RPL19P84098 196 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 PITPNAQ00169 270 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OGDHQ02218 1023 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 EMX1Q04741 257 aaPredicted RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 ABRAXAS2Q15018 415 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR4D1Q15615 310 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 VAMP3Q15836 100 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CYBRD1Q53TN4 286 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PIGGQ5H8A4 983 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RBM48Q5RL73 367 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 PHYHD1Q5SRE7 291 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TPRG1LQ5T0D9 272 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 GPR157Q5UAW9 335 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 STEAP4Q687X5 459 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TMEM225Q6GV28 225 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 LAMTOR1Q6IAA8 161 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR4F3Q6IEY1 312 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 APOBEC3HQ6NTF7 200 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 HAGHLQ6PII5 290 aaPredicted RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 WDR59Q6PJI9 974 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ZNF841Q6ZN19 808 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 FAM183BPQ6ZVS7 135 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MOB2Q70IA6 237 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 STRADAQ7RTN6 431 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TSEN54Q7Z6J9 526 aaKnown RBP2.6□□□□□ -1.99
USP28-210ENST00000542033 SLC26A11Q86WA9 606 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 NAXDQ8IW45 347 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 WDFY1Q8IWB7 410 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 NRMQ8IXM6 262 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CPNE9Q8IYJ1 553 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ZNF100Q8IYN0 542 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 PGAM4Q8N0Y7 254 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CLDN22Q8N7P3 220 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 C15orf54Q8N8G6 183 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 TMEM161BQ8NDZ6 487 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 BPIFB6Q8NFQ5 453 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR5T3Q8NGG3 340 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR8J1Q8NGP2 316 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR11L1Q8NGX0 322 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 OR4C6Q8NH72 309 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 COQ8AQ8NI60 647 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 DYNC2LI1Q8TCX1 351 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CD200R1Q8TD46 325 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 RNF133Q8WVZ7 376 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ACOT12Q8WYK0 555 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 C11orf52Q96A22 123 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 ADIPOR1Q96A54 375 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 MALSU1Q96EH3 234 aa2.6□□□□□ -1.99
USP28-210ENST00000542033 CERS2Q96G23 380 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms