RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZDHHC18Q9NUE0 388 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.49□□□□□ -1.21
YBX3-211ENST00000541351 MINOS1-NBL1R4GNA1 71 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 TRAPPC13A5PLN9 417 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 FAM90A22PA8MWA6 464 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 A8MZ25 164 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 PRR23D1E9PI22 279 aaPredicted RBP7.48□□□□□ -1.21
YBX3-211ENST00000541351 XKRYO14609 159 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 OR7A10O76100 309 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 MT-ND1P03886 318 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 LCATP04180 440 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 IL6P05231 212 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 DBHP09172 617 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 FAM153BP0C7A2 387 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 PRR23D2P0DMB1 279 aaPredicted RBP7.48□□□□□ -1.21
YBX3-211ENST00000541351 GP9P14770 177 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 MVDP53602 400 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 KIR2DS1Q14954 304 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 ZNF770Q6IQ21 691 aaPredicted RBP7.48□□□□□ -1.21
YBX3-211ENST00000541351 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 ZNF788Q6ZQV5 615 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 LYPD6Q86Y78 171 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 CALHM1Q8IU99 346 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 TMEM185AQ8NFB2 350 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 OR6Q1Q8NGQ2 317 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 SLC25A33Q9BSK2 321 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 GHITMQ9H3K2 345 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 AKTIPQ9H8T0 292 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 SLAMF8Q9P0V8 285 aa7.48□□□□□ -1.21
YBX3-211ENST00000541351 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 HTR3EA5X5Y0 456 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 ANKRD30BLA7E2S9 258 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 OR2F2O95006 317 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 C1QCP02747 245 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 SNRNP70P08621 437 aaKnown RBP7.47□□□□□ -1.21
YBX3-211ENST00000541351 ACAA1P09110 424 aaPredicted RBP7.47□□□□□ -1.21
YBX3-211ENST00000541351 LBPP18428 481 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 GNALP38405 381 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 DDOSTP39656 456 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 POU3F4P49335 361 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 CAPZA1P52907 286 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 GNG11P61952 73 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 RPL31P62899 125 aaKnown RBP7.47□□□□□ -1.21
YBX3-211ENST00000541351 DYNC1I2Q13409 638 aaKnown RBP7.47□□□□□ -1.21
YBX3-211ENST00000541351 PCLAFQ15004 111 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 RGNQ15493 299 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 SNCBQ16143 134 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 ZNF626Q68DY1 528 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 TEX38Q6PEX7 206 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 LCNL1Q6ZST4 164 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 ZNF572Q7Z3I7 529 aaPredicted RBP7.47□□□□□ -1.21
YBX3-211ENST00000541351 ZNF329Q86UD4 541 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 CYB561A3Q8NBI2 242 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 OR10Z1Q8NGY1 313 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 NDNFQ8TB73 568 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 SGTBQ96EQ0 304 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 LYZL4Q96KX0 146 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 NDEL1Q9GZM8 345 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 SLC7A7Q9UM01 511 aa7.47□□□□□ -1.21
YBX3-211ENST00000541351 MUC4Q99102 2169 aa7.46□□□□□ -1.21
YBX3-211ENST00000541351 TEX13CA0A0J9YWL9 993 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 CPSF4LA6NMK7 179 aaKnown RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 F5H5K5 113 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 RER1O15258 196 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 RBP4P02753 201 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 OR8U8P0C7N1 319 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 IGHV4-30-4P0DP06 118 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 BMP2P12643 396 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 CNTFRP26992 372 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 SDHAP31040 664 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 RBM34P42696 430 aaKnown RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 GABRA2P47869 451 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 ENTPD1P49961 510 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 TPTEP56180 551 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 SNAPC1Q16533 368 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 DGUOKQ16854 277 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 ANKDD1AQ495B1 522 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 CCDC92Q53HC0 331 aaPredicted RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 CXorf66Q5JRM2 361 aaPredicted RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 ENTPD8Q5MY95 495 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 WDR82Q6UXN9 313 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 ZBTB49Q6ZSB9 765 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 MSANTD1Q6ZTZ1 278 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 HDXQ7Z353 690 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 FOXRED2Q8IWF2 684 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 DYNAPQ8N1N2 210 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 OR11H6Q8NGC7 330 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 OR5T2Q8NGG2 359 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 LIPHQ8WWY8 451 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 MAL2Q969L2 176 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 ITCHQ96J02 903 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 RBM14Q96PK6 669 aaKnown RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 GAFA1Q96PS6 74 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 DUX3Q96PT4 197 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 RAB3IPQ96QF0 476 aaPredicted RBP7.46□□□□□ -1.22
YBX3-211ENST00000541351 ZNF426Q9BUY5 554 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 ST6GALNAC5Q9BVH7 336 aa7.46□□□□□ -1.22
YBX3-211ENST00000541351 MED4Q9NPJ6 270 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms