RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 EMP2P54851 167 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CMBLQ96DG6 245 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CNTNAP3BQ96NU0 1288 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 A0A1B0GV90 55 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 LMX1BO60663 402 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 ABHD16AO95870 558 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CSF1P09603 554 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF44P15621 663 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CTLA4P16410 223 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CPT2P23786 658 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 F2RL1P55085 397 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 OLFML2AQ68BL7 652 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 COMMD2Q86X83 199 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 GALNT16Q8N428 558 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 OR4A4PQ8NGN8 299 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 PADI1Q9ULC6 663 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 COA3Q9Y2R0 106 aaPredicted RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 C1orf196B1AJZ1 125 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 IL5P05113 134 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 CD2P06729 351 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 ASAH2BP0C7U1 165 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 RAB5BP61020 215 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 FMODQ06828 376 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 OR1J4Q8NGS1 313 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF251Q9BRH9 671 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 EMC3Q9P0I2 261 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 MBD2Q9UBB5 411 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 ETV7Q9Y603 341 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 TMEM14AQ9Y6G1 99 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 COL6A6A6NMZ7 2263 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 A6NLC8 198 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 HLA-DOBP13765 273 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 OR52W1Q6IF63 320 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 ANKRD16Q6P6B7 361 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 BHLHE23Q8NDY6 225 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 OTOSQ8NHW6 89 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 CA5BP1Q8WTZ4 195 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 SPACA5Q96QH8 159 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 CHRNA10Q9GZZ6 450 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 SRPK3Q9UPE1 567 aa12.72□□□□□ -0.37
SFSWAP-210ENST00000541286 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 HTR3BO95264 441 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 CYB5AP00167 134 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 AKR1C4P17516 323 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 RASGEF1BQ0VAM2 473 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 FUT7Q11130 342 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 CDNFQ49AH0 187 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 SLC18B1Q6NT16 456 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 MRPL14Q6P1L8 145 aaKnown RBP12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 GABRG1Q8N1C3 465 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 VDAC3Q9Y277 283 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 TMEM82A0PJX8 343 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 CLPSP04118 112 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 GP1BBP13224 206 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 IL11P20809 199 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 CD34P28906 385 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 CD80P33681 288 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 SLC25A1P53007 311 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 TRA2AQ13595 282 aaKnown RBP eCLIP12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 MOGAT2Q3SYC2 334 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 INO80EQ8NBZ0 244 aaPredicted RBP12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 UQCC1Q9NVA1 299 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 PCDHGA1Q9Y5H4 931 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 HS3ST3B1Q9Y662 390 aa12.71□□□□□ -0.37
SFSWAP-210ENST00000541286 IGKV3D-11A0A0A0MRZ8 115 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 TRBV5-5A0A0J9YX44 114 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 G3V3Y1 287 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 ARG1P05089 322 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 SERPINA5P05154 406 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 HTR2CP28335 458 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 RIDAP52758 137 aaKnown RBP12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC17A1Q14916 467 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC22A6Q4U2R8 563 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 PAPD4Q6PIY7 484 aaKnown RBP12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC43A2Q8N370 569 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 LIN37Q96GY3 246 aaPredicted RBP12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 EMC6Q9BV81 110 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF160Q9HCG1 818 aa12.71□□□□□ -0.38
SFSWAP-210ENST00000541286 DNAJC13O75165 2243 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms