RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 OR2M2Q96R28 347 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 NPY6RQ99463 290 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TEAD3Q99594 435 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 P2RY13Q9BPV8 354 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 IL22Q9GZX6 179 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 OR2AG1Q9H205 316 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 SPNS1Q9H2V7 528 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 RANBP3Q9H6Z4 567 aaPredicted RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 SMYD3Q9H7B4 428 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 CTPS2Q9NRF8 586 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 TBL2Q9Y4P3 447 aaKnown RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 MRPS18BQ9Y676 258 aaKnown RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 SAR1BQ9Y6B6 198 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 MYH7P12883 1935 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 ERCC6L2Q5T890 1561 aa3.5□□□□□ -1.85
YBX3-210ENST00000540975 DDX60Q8IY21 1712 aaKnown RBP3.5□□□□□ -1.85
YBX3-210ENST00000540975 MROH2AA6NES4 1674 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 MROH7-TTC4A0A0A0MT08 1334 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 USP42Q9H9J4 1324 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 ALKQ9UM73 1620 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PPIAL4CA0A0B4J2A2 164 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 FAM240BA0A1B0GVZ2 78 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 TEX46H3BTG2 121 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 M0QZK8 103 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 DLGAP1O14490 977 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 ARPC3O15145 178 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PRKYO43930 277 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OR7A10O76100 309 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 SHBGP04278 402 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GYPCP04921 128 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 FBP1P09467 338 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 SMIM6P0DI80 62 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PPIAL4GP0DN37 164 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 THRAP10827 490 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 RAB3AP20336 220 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GSTM3P21266 225 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 LAP3P28838 519 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 GRIA1P42261 906 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 MAGEA6P43360 314 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PRKXP51817 358 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 ATP5J2P56134 94 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 RPL26P61254 145 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 RBX1P62877 108 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 EWSR1Q01844 656 aaKnown RBP eCLIP3.49□□□□□ -1.85
YBX3-210ENST00000540975 IRF8Q02556 426 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 TGFBR3Q03167 851 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 BAMBIQ13145 260 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 EIF4EBP1Q13541 118 aaPredicted RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 C16orf72Q14CZ0 275 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 RAET1LQ5VY80 246 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 ELP2Q6IA86 826 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 NIPAL1Q6NVV3 410 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 LRRN1Q6UXK5 716 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GDPD3Q7L5L3 318 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 DPY19L4Q7Z388 723 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 ZNF561Q8N587 486 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OR4D6Q8NGJ1 314 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OR51G2Q8NGK0 314 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OR2V1Q8NHB1 315 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GTF2H4Q92759 462 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 BIRC8Q96P09 236 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 GPA33Q99795 319 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OMDQ99983 421 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 SLC38A1Q9H2H9 487 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 OR51M1Q9H341 326 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 SIAEQ9HAT2 523 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 TAS2R9Q9NYW1 312 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 ADA2Q9NZK5 511 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PISDQ9UG56 409 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 STOML2Q9UJZ1 356 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 NDRG2Q9UN36 371 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 MRPS33Q9Y291 106 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 MMACHCQ9Y4U1 282 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 NUBP2Q9Y5Y2 271 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 XRN1Q8IZH2 1706 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 PARP4Q9UKK3 1724 aaKnown RBP3.49□□□□□ -1.85
YBX3-210ENST00000540975 CARMIL3Q8ND23 1372 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PIK3C2AO00443 1686 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 PSME4Q14997 1843 aa3.49□□□□□ -1.85
YBX3-210ENST00000540975 MYO5AQ9Y4I1 1855 aaKnown RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 DIP2CQ9Y2E4 1556 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 SERPINE3A8MV23 424 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CLDN5O00501 218 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 FCMRO60667 390 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CCDC22O60826 627 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 LDOC1O95751 146 aaPredicted RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 SLC25A27O95847 323 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 KLK3P07288 261 aaPredicted RBP3.48□□□□□ -1.85
YBX3-210ENST00000540975 RD3LP0DJH9 198 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CD36P16671 472 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 PSMC3P17980 439 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 PGCP20142 388 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 ME2P23368 584 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 CEACAM3P40198 252 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 RAB9AP51151 201 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 NDUFA8P51970 172 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 C21orf59P57076 290 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 MLF1P58340 268 aa3.48□□□□□ -1.85
YBX3-210ENST00000540975 IFITM2Q01629 132 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms