RNA–Protein interactions for RNA: ENST00000540438.5

USP28-208, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 3,015 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-208ENST00000540438 ZBTB8AQ96BR9 441 aa14.89□□□□□ -0.03
USP28-208ENST00000540438 OXGR1Q96P68 337 aa14.89□□□□□ -0.03
USP28-208ENST00000540438 MRI1Q9BV20 369 aa14.89□□□□□ -0.03
USP28-208ENST00000540438 GSX2Q9BZM3 304 aa14.89□□□□□ -0.03
USP28-208ENST00000540438 ZNF701Q9NV72 531 aaPredicted RBP14.89□□□□□ -0.03
USP28-208ENST00000540438 TAS2R8Q9NYW2 309 aa14.89□□□□□ -0.03
USP28-208ENST00000540438 TP53I11O14683 189 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 FCGR2AP12318 317 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 S100A11P31949 105 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 OR51T1Q8NGJ9 327 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 LINC00052Q96N35 136 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 PIEZO2Q9H5I5 2752 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 DIDO1Q9BTC0 2240 aaKnown RBP14.88□□□□□ -0.03
USP28-208ENST00000540438 TRAV14DV4A0A0A6YYC5 116 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 LDLRAD4O15165 306 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 CXCL13O43927 109 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 Q0VFX4 171 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 IGFBP7Q16270 282 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 AANATQ16613 207 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 LPAR5Q9H1C0 372 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 CRLF2Q9HC73 371 aa14.88□□□□□ -0.03
USP28-208ENST00000540438 PNRC2Q9NPJ4 139 aaKnown RBP14.88□□□□□ -0.03
USP28-208ENST00000540438 C9J4A7 227 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 KNG1P01042 644 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 GABRA1P14867 456 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 SSR4P51571 173 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 RRADP55042 308 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 UBE2V2Q15819 145 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 MICBQ29980 383 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 ZNF774Q6NX45 483 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 SLC25A47Q6Q0C1 308 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 TMEM200AQ86VY9 491 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 OR4K15Q8NH41 348 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 RHBDD1Q8TEB9 315 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 PNPLA2Q96AD5 504 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 RAB3CQ96E17 227 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 FBXO17Q96EF6 278 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 OR51B6Q9H340 312 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 ACKR4Q9NPB9 350 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 PIGLQ9Y2B2 252 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 OR2A4O95047 310 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 ITGB2P05107 769 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 ELP2Q6IA86 826 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 C6orf201Q7Z4U5 140 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 CARFQ8N187 725 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 SPICQ8N5J4 248 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 FGFBP3Q8TAT2 258 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 PPP1R1CQ8WVI7 109 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 OR2A7Q96R45 310 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 ULBP2Q9BZM5 246 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 RAB22AQ9UL26 194 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 IL5P05113 134 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 C3AR1Q16581 482 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 PCK2Q16822 640 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 RSPO1Q2MKA7 263 aaPredicted RBP14.87□□□□□ -0.03
USP28-208ENST00000540438 DNM1P46Q6ZS02 220 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 TIPARPQ7Z3E1 657 aaKnown RBP14.87□□□□□ -0.03
USP28-208ENST00000540438 ESX1Q8N693 406 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 OR10R2Q8NGX6 335 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 SUN5Q8TC36 379 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 WNT2BQ93097 391 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 TMEM59Q9BXS4 323 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 PLA2G3Q9NZ20 509 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 NCKAP5O14513 1909 aa14.87□□□□□ -0.03
USP28-208ENST00000540438 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 PINLYPA6NC86 204 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 OR5H14A6NHG9 310 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 AQP7P3A6NL99 342 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 SNRPGP15A8MWD9 76 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 ISG15P05161 165 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 CPN1P15169 458 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 SUCLG1P53597 346 aaKnown RBP14.86□□□□□ -0.03
USP28-208ENST00000540438 STPG2Q8N412 459 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 ABHD3Q8WU67 409 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 IGKV1D-8A0A087WSZ0 117 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 CCDC187A0A096LP49 1063 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 A0A096LPE4 126 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 IGHV3-64DA0A0J9YX35 117 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 A0A1W2PPZ6 126 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 OR14I1A6ND48 311 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 RP2O75695 350 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 CELA3AP09093 270 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 BLVRBP30043 206 aaPredicted RBP14.86□□□□□ -0.03
USP28-208ENST00000540438 OPRM1P35372 400 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 LUMP51884 338 aaPredicted RBP14.86□□□□□ -0.03
USP28-208ENST00000540438 HGFACQ04756 655 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 C1orf100Q5SVJ3 147 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 PXDC1Q5TGL8 231 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 MAML2Q8IZL2 1156 aaPredicted RBP14.86□□□□□ -0.03
USP28-208ENST00000540438 GSKIPQ9P0R6 139 aa14.86□□□□□ -0.03
USP28-208ENST00000540438 FSTP19883 344 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 KISS1Q15726 138 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 LYPD6Q86Y78 171 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 TMEM229BQ8NBD8 167 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 OR6X1Q8NH79 312 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 AQP3Q92482 292 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 NAT6Q93015 286 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 IMMP1LQ96LU5 166 aa14.85□□□□□ -0.03
USP28-208ENST00000540438 DEPPQ9NTK1 212 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms