RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 HSD17B1P14061 328 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ANOS1P23352 680 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 RRM2P31350 389 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 TEX30Q5JUR7 227 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 PGBD2Q6P3X8 592 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 Q6ZSV7 163 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 VMO1Q7Z5L0 202 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 CMTM4Q8IZR5 234 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 LINC00471Q8N535 108 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 OR8S1Q8NH09 359 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ST8SIA4Q92187 359 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 SLAMF6Q96DU3 332 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 SP140LQ9H930 580 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 TCF7L1Q9HCS4 588 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 IL1RAPQ9NPH3 570 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 IL20Q9NYY1 176 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ADA2Q9NZK5 511 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNRD1Q9P1U0 126 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 VPREB3Q9UKI3 123 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 FAM96BQ9Y3D0 163 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 V9GYQ6 96 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 VWFP04275 2813 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 TGP01266 2768 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 BTBD17A6NE02 478 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 TSPAN9O75954 239 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 KRT36O76013 467 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 SLC2A1P11166 492 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 PSKH1P11801 424 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 CFL1P23528 166 aaKnown RBP9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 FMO3P31513 532 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 NAA10P41227 235 aaPredicted RBP9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 SLC15A1P46059 708 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 ENTPD1P49961 510 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 PRKXP51817 358 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 HMGA2P52926 109 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 BLVRAP53004 296 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 GRB2P62993 217 aaKnown RBP9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 FAM3AP98173 230 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 TAF13Q15543 124 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 DHRS7BQ6IAN0 325 aaPredicted RBP9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 SLC16A9Q7RTY1 509 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 C11orf53Q8IXP5 236 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 RNF148Q8N7C7 305 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 CYB561A3Q8NBI2 242 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 SLC37A3Q8NCC5 494 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 OR1M1Q8NGA1 313 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 LRRC29Q8WV35 223 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNRF4Q8WWF5 429 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 NSMCE2Q96MF7 247 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 PKP2Q99959 881 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 TLNRD1Q9H1K6 362 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 MYLK2Q9H1R3 596 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 TOR3AQ9H497 397 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 EGLN3Q9H6Z9 239 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 CENPMQ9NSP4 180 aa9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 PRPF19Q9UMS4 504 aaKnown RBP9.88□□□□□ -0.83
CBX3P4-202ENST00000540428 IGHV3OR15-7A0A075B7D8 119 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 APOC1P02654 83 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 SPARCP09486 303 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 EEF1B2P24534 225 aaKnown RBP9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 TGFBR2P37173 567 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 SLC25A1P53007 311 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 SNCBQ16143 134 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 C2orf68Q2NKX9 166 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 WDR38Q5JTN6 314 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 ATPAF1Q5TC12 328 aaPredicted RBP9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 LYPD4Q6UWN0 246 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 WDR82Q6UXN9 313 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 RASSF6Q6ZTQ3 369 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 DPY19L4Q7Z388 723 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 WDR86Q86TI4 376 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 LNX2Q8N448 690 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 GALNT4Q8N4A0 578 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 OR51L1Q8NGJ5 315 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 OR5R1Q8NH85 324 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 C8orf46Q8TAG6 207 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 CCL13Q99616 98 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 NMNAT2Q9BZQ4 307 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 DNTTIP1Q9H147 329 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 ONECUT1Q9UBC0 465 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 BAIAP2Q9UQB8 552 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 CMYA5Q8N3K9 4069 aa9.87□□□□□ -0.83
CBX3P4-202ENST00000540428 hCG_38984A0A1B0GV85 526 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 A0A1B0GW55 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF593O00488 134 aaPredicted RBP9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 TBX1O43435 398 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 NDUFB3O43676 98 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 TSPAN15O95858 294 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L2P0CJ85 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L3P0CJ86 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L4P0CJ87 422 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L5P0CJ88 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L6P0CJ89 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 DUX4L7P0CJ90 424 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 TGM4P49221 684 aa9.86□□□□□ -0.83
CBX3P4-202ENST00000540428 CX3CR1P49238 355 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms