RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SLC18B1Q6NT16 456 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 DNM1P34Q6PK57 102 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 CRIP3Q6Q6R5 217 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 DUX4L9Q6RFH8 374 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 PTCHD4Q6ZW05 846 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 SLC36A1Q7Z2H8 476 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 ADCK1Q86TW2 530 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 C8orf46Q8TAG6 207 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 CMTM5Q96DZ9 223 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 WWC2-AS2Q96NR7 200 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 TSSK2Q96PF2 358 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 ATF6BQ99941 703 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 MEGF9Q9H1U4 602 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 RNPEPL1Q9HAU8 725 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 C14orf119Q9NWQ9 140 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 DUX4Q9UBX2 424 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 SNX13Q9Y5W8 968 aa9.48□□□□□ -0.89
CLSTN3-209ENST00000539982 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 J3KTA2 159 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 DCTN6O00399 190 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 SOCS2O14508 198 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 TXNDC12O95881 172 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 T-ENOLP0DO92 83 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 CD28P10747 220 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 GRK5P34947 590 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 TGM4P49221 684 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 ELF3P78545 371 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 ZNF92Q03936 586 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 MAPRE2Q15555 327 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 AANATQ16613 207 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 PCK2Q16822 640 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 PGBD2Q6P3X8 592 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 RRM2BQ7LG56 351 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 LINC00346Q8IVM7 164 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 FAM216BQ8N7L0 139 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 OR8J3Q8NGG0 315 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 OR51G2Q8NGK0 314 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 OR2AJ1Q8NGZ0 328 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 SLC7A13Q8TCU3 470 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 GPX7Q96SL4 187 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 NPFFR1Q9GZQ6 430 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 PNRC2Q9NPJ4 139 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 B9D1Q9UPM9 204 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 SF3B6Q9Y3B4 125 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 IER3IP1Q9Y5U9 82 aa9.47□□□□□ -0.89
CLSTN3-209ENST00000539982 IGLV1-36A0A0B4J1U3 117 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 M0R1W7 72 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 BHLHE40O14503 412 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 ACOT8O14734 319 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 COX4I1P13073 169 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 IGLL1P15814 213 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 RASSF2P50749 326 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 MNAT1P51948 309 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 IKZF1Q13422 519 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 LRRC75BQ2VPJ9 315 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 SLC36A3Q495N2 470 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 ATPAF1Q5TC12 328 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 CCBE1Q6UXH8 406 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 DPY19L2P2Q6ZN68 376 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 LIAT1Q6ZQX7 453 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 OR6V1Q8N148 313 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 SLC26A10Q8NG04 563 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 RP9Q8TA86 221 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 C17orf50Q8WW18 174 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 RORBQ92753 470 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 C12orf43Q96C57 262 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 AJUBAQ96IF1 538 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 METTL8Q9H825 291 aaKnown RBP9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 SERTAD4Q9NUC0 356 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 ADA2Q9NZK5 511 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 CYB5R1Q9UHQ9 305 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 SIGLEC7Q9Y286 467 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 TMEM5Q9Y2B1 443 aa9.46□□□□□ -0.9
CLSTN3-209ENST00000539982 LOC100653049A0A140TA62 436 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 M0R135 149 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 KRT34O76011 436 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 IFNW1P05000 195 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 FAHP16930 419 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 AMY2BP19961 511 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 CD33P20138 364 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 NAA10P41227 235 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 RPS6KA3P51812 740 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 BLMHQ13867 455 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 RFX4Q33E94 735 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 ZBTB37Q5TC79 503 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
CLSTN3-209ENST00000539982 PAPD5Q8NDF8 572 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms