RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 C10orf35Q96D05 121 aa13.94□□□□□ -0.18
TRAF3-204ENST00000539721 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
TRAF3-204ENST00000539721 REPIN1Q9BWE0 567 aaKnown RBP13.94□□□□□ -0.18
TRAF3-204ENST00000539721 OPA3Q9H6K4 179 aa13.94□□□□□ -0.18
TRAF3-204ENST00000539721 PMF1-BGLAPU3KQ54 211 aa13.94□□□□□ -0.18
TRAF3-204ENST00000539721 CFAP46Q8IYW2 2715 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 HIVEP3Q5T1R4 2406 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 ANXA2P2A6NMY6 339 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 CRYAAP02489 173 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 ADRA2CP18825 462 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 ACKR3P25106 362 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 DDOSTP39656 456 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 RAD52P43351 418 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 OR8B8Q15620 311 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 ZNF404Q494X3 552 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 SPATA46Q5T0L3 261 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 OR1M1Q8NGA1 313 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 OR13C9Q8NGT0 318 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 MCFD2Q8NI22 146 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 ZCCHC4Q9H5U6 513 aa13.93□□□□□ -0.18
TRAF3-204ENST00000539721 HEATR1Q9H583 2144 aaKnown RBP13.93□□□□□ -0.18
TRAF3-204ENST00000539721 A0A0G2JK05 382 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 GGT3PA6NGU5 568 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 GRNP28799 593 aaKnown RBP13.92□□□□□ -0.18
TRAF3-204ENST00000539721 SPOCK1Q08629 439 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 TNK1Q13470 666 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 SFXN4Q6P4A7 337 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 XKRXQ6PP77 449 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 OR51A2Q8NGJ7 313 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 ITLN2Q8WWU7 325 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-204ENST00000539721 PP6455Q8WZ26 134 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 GFI1Q99684 422 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 SLC30A2Q9BRI3 323 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 BCL2L14Q9BZR8 327 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 PLEKHB1Q9UF11 243 aaPredicted RBP13.92□□□□□ -0.18
TRAF3-204ENST00000539721 V9GY05 133 aa13.92□□□□□ -0.18
TRAF3-204ENST00000539721 NOTOA8MTQ0 251 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 CLPXO76031 633 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 CLDN14O95500 239 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 RAB3AP20336 220 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 AGAP20933 346 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 ERVS71-1P61550 626 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 SORDQ00796 357 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 IDNKQ5T6J7 187 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 ZNF808Q8N4W9 903 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-204ENST00000539721 DNAAF1Q8NEP3 725 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 OR56B2PQ8NGI1 322 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 SLC25A40Q8TBP6 338 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 DACH2Q96NX9 599 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 TSC22D3Q99576 134 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 OR2J1Q9GZK6 312 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 CHST5Q9GZS9 411 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 NGBQ9NPG2 151 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 NDRG3Q9UGV2 375 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 SPEF1Q9Y4P9 236 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 SULT1B1O43704 296 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 PTAFRP25105 342 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 CD40P25942 277 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 BDKRB2P30411 391 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 PSMD7P51665 324 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 SNTB1Q13884 538 aaKnown RBP13.91□□□□□ -0.18
TRAF3-204ENST00000539721 ZNF529Q6P280 563 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 FBXW12Q6X9E4 464 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 AP3S1Q92572 193 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-204ENST00000539721 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
TRAF3-204ENST00000539721 MMP27Q9H306 513 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 DAPK2Q9UIK4 370 aa13.91□□□□□ -0.18
TRAF3-204ENST00000539721 HCFC1P51610 2035 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 ZNF816-ZNF321PA0A0X1KG74 233 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 MEGF11A6BM72 1044 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 OCMP0CE72 109 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-204ENST00000539721 TFF3Q07654 80 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 ZBTB37Q5TC79 503 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 GLT8D1Q68CQ7 371 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 UTS2BQ765I0 119 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 C1orf174Q8IYL3 243 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 LINC01560Q8TB33 94 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 ITFG2Q969R8 447 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 CMBLQ96DG6 245 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 RADILQ96JH8 1075 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 TMEM138Q9NPI0 162 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 GPR173Q9NS66 373 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 KCNN3Q9UGI6 736 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 A3GALT2U3KPV4 340 aa13.9□□□□□ -0.18
TRAF3-204ENST00000539721 KMT2BQ9UMN6 2715 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-204ENST00000539721 A0A075B6Q4 140 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 ATP6V1G2-DDX39BF2Z307 99 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 ERCC1P07992 297 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-204ENST00000539721 SLC2A2P11168 524 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-204ENST00000539721 TUBG1P23258 451 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
TRAF3-204ENST00000539721 CLVS2Q5SYC1 327 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 HES5Q5TA89 166 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 NKAIN3Q8N8D7 197 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 CSNK2A3Q8NEV1 391 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 SMURF1Q9HCE7 757 aa13.89□□□□□ -0.19
TRAF3-204ENST00000539721 TUBG2Q9NRH3 451 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms