RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR10H5Q8NGA6 315 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 SCARB1Q8WTV0 552 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 SF3B5Q9BWJ5 86 aaKnown RBP15.06■□□□□ 0
PCDHB17P-201ENST00000539533 PRRC2CQ9Y520 2896 aaKnown RBP15.06■□□□□ 0
PCDHB17P-201ENST00000539533 UBE2QL1A1L167 161 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF716A6NP11 495 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 HMSDA8MTL9 139 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 GFRA3O60609 400 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 AQP8O94778 261 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 PNPP00491 289 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 MAPK3P27361 379 aaPredicted RBP15.05■□□□□ 0
PCDHB17P-201ENST00000539533 CSNK1A1P48729 337 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 FOXC1Q12948 553 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 SLC36A1Q7Z2H8 476 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 LRRTM1Q86UE6 522 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 BVESQ8NE79 360 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 OR5AK2Q8NH90 309 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 PPP1R14AQ96A00 147 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 GINS4Q9BRT9 223 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 DEFB127Q9H1M4 99 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 CYB5R1Q9UHQ9 305 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 LRP12Q9Y561 859 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 FLVCR1Q9Y5Y0 555 aa15.05■□□□□ 0
PCDHB17P-201ENST00000539533 DNAJC13O75165 2243 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 H3BSH0 61 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 SIX6O95475 246 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 PLATP00750 562 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 FGF2P09038 288 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 RAB3AP20336 220 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 FAUP35544 74 aaKnown RBP15.05■□□□□ -0
PCDHB17P-201ENST00000539533 H2BFSP57053 126 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 PLA2G7Q13093 441 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 RBMS2Q15434 407 aaKnown RBP15.05■□□□□ -0
PCDHB17P-201ENST00000539533 PCGF3Q3KNV8 242 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 ATRAIDQ6UW56 229 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 C17orf107Q6ZR85 190 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 TMEM178AQ8NBL3 297 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 RNF128Q8TEB7 428 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 TMEM54Q969K7 222 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 SAV1Q9H4B6 383 aaPredicted RBP15.05■□□□□ -0
PCDHB17P-201ENST00000539533 LIPGQ9Y5X9 500 aa15.05■□□□□ -0
PCDHB17P-201ENST00000539533 OR4C45A6NMZ5 311 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 KLK10O43240 276 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 PPP3CBP16298 524 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 CALCRP30988 508 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 KIR3DL2P43630 455 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 PMP22Q01453 160 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ZNF169Q14929 603 aaPredicted RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 SLC10A1Q14973 349 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 C2orf68Q2NKX9 166 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ABHD3Q8WU67 409 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 CPNE4Q96A23 557 aaPredicted RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ARL6Q9H0F7 186 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 CENPMQ9NSP4 180 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 PRELID3BQ9Y3B1 194 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 URB1O60287 2271 aaKnown RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 FXYD6-FXYD2A0A087WZ82 144 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 TRBV5-5A0A0J9YX44 114 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 H7C417 338 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 RBBP9O75884 186 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 GABRA1P14867 456 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ZNF708P17019 499 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 RIDAP52758 137 aaKnown RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 WDR38Q5JTN6 314 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ABLIM2Q6H8Q1 611 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 IGFL2Q6UWQ7 119 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 OR4C16Q8NGL9 310 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 FXYD6Q9H0Q3 95 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 MTFP1Q9UDX5 166 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 FOXD3Q9UJU5 478 aaPredicted RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 GTF2A1LQ9UNN4 478 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 SLC22A13Q9Y226 551 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 LHFPL6Q9Y693 200 aa15.04■□□□□ -0
PCDHB17P-201ENST00000539533 SPENQ96T58 3664 aaKnown RBP15.04■□□□□ -0
PCDHB17P-201ENST00000539533 ANXA2P2A6NMY6 339 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 XRCC3O43542 346 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 APOC3P02656 99 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 RLN1P04808 185 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 ANXA2P07355 339 aaKnown RBP15.03■□□□□ -0
PCDHB17P-201ENST00000539533 ZNF35P13682 527 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 MFGE8Q08431 387 aaPredicted RBP15.03■□□□□ -0
PCDHB17P-201ENST00000539533 PDSS1Q5T2R2 415 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 ZNF676Q8N7Q3 588 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 OR10AC1Q8NH08 325 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 C4orf45Q96LM5 186 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 TRAV8-7A0A075B6U6 113 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 HSPB2A8KAH6 182 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 F5H5P2 479 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 MAS1P04201 325 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 CBX5P45973 191 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 RASGEF1BQ0VAM2 473 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 HSPB2Q16082 182 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 C3AR1Q16581 482 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 ZNF837Q96EG3 531 aaPredicted RBP15.03■□□□□ -0
PCDHB17P-201ENST00000539533 ACKR4Q9NPB9 350 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 GPR160Q9UJ42 338 aa15.03■□□□□ -0
PCDHB17P-201ENST00000539533 DNASE2O00115 360 aaPredicted RBP15.02■□□□□ -0
PCDHB17P-201ENST00000539533 GOSR2O14653 212 aa15.02■□□□□ -0
PCDHB17P-201ENST00000539533 CYTIPO60759 359 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms