RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 JMJD8Q96S16 334 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 AMELYQ99218 206 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 TMEM246Q9BRR3 403 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 SUCNR1Q9BXA5 334 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 YIPF3Q9GZM5 350 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 GABARAPL1Q9H0R8 117 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 RNF7Q9UBF6 113 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 INSIG2Q9Y5U4 225 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
RTN3-209ENST00000538995 TRAPPC2LH3BP13 241 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 PHYHO14832 338 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 ALOX5APP20292 161 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 RBMXP38159 391 aaKnown RBP9.67□□□□□ -0.86
RTN3-209ENST00000538995 NAA10P41227 235 aaPredicted RBP9.67□□□□□ -0.86
RTN3-209ENST00000538995 PITPNBP48739 271 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 HILS1P60008 231 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 GNB2P62879 340 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 PAX2Q02962 417 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 APOFQ13790 326 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 OR8B8Q15620 311 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 MPPED2Q15777 294 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 TMEM236Q5W0B7 351 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 DEGS2Q6QHC5 323 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 BTNL3Q6UXE8 466 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 BBS1Q8NFJ9 593 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 THEM6Q8WUY1 208 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 SGK3Q96BR1 496 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 PGAM5Q96HS1 289 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 MRI1Q9BV20 369 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 ABCB9Q9NP78 766 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 MMP26Q9NRE1 261 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 KRT84Q9NSB2 600 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 UFSP2Q9NUQ7 469 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 TVP23BQ9NYZ1 205 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 DNAJC27Q9NZQ0 273 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 LAMP5Q9UJQ1 280 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 AP4S1Q9Y587 144 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 N6AMT1Q9Y5N5 214 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 AUP1Q9Y679 476 aa9.67□□□□□ -0.86
RTN3-209ENST00000538995 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 CCDC182A6NF36 153 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 ACOD1A6NK06 481 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 G3V2T6 193 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 LGALS8O00214 317 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 NDUFA2O43678 99 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 CIB2O75838 187 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 ZNF205O95201 554 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 VENTXO95231 258 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 FPR2P25090 351 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 DCTDP32321 178 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 GNALP38405 381 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 PSMB10P40306 273 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 GSK3AP49840 483 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 NPY4RP50391 375 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
RTN3-209ENST00000538995 IL5RAQ01344 420 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 PAX8Q06710 450 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 PTGES3Q15185 160 aaKnown RBP9.66□□□□□ -0.86
RTN3-209ENST00000538995 ARMCX4Q5H9R4 360 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 SLX4IPQ5VYV7 408 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 KDM4DQ6B0I6 523 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 KCTD18Q6PI47 426 aaPredicted RBP9.66□□□□□ -0.86
RTN3-209ENST00000538995 LRRN1Q6UXK5 716 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 BPIFB2Q8N4F0 458 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 OR8S1Q8NH09 359 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 ASB17Q8WXJ9 295 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 DACT3Q96B18 629 aaPredicted RBP9.66□□□□□ -0.86
RTN3-209ENST00000538995 TEAD3Q99594 435 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 CLN8Q9UBY8 286 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 TMEM14AQ9Y6G1 99 aa9.66□□□□□ -0.86
RTN3-209ENST00000538995 TRAV38-1A0A0B4J264 116 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 OOEPA6NGQ2 149 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 SLC22A31A6NKX4 558 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 A6NLC8 198 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 ANXA2P2A6NMY6 339 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 ZAR1LA6NP61 321 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 PRKYO43930 277 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 ZNF254O75437 659 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 ROM1Q03395 351 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 GFOD2Q3B7J2 385 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 NXNL2Q5VZ03 156 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 C12orf73Q69YU5 71 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 KRT77Q7Z794 578 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 RAB40AQ8WXH6 277 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 DVL3Q92997 716 aaPredicted RBP9.65□□□□□ -0.86
RTN3-209ENST00000538995 CNN2Q99439 309 aaKnown RBP9.65□□□□□ -0.86
RTN3-209ENST00000538995 MNTQ99583 582 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 PAPOLGQ9BWT3 736 aaKnown RBP9.65□□□□□ -0.86
RTN3-209ENST00000538995 OSBPL10Q9BXB5 764 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 MROQ9BYG7 248 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 TLNRD1Q9H1K6 362 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 RNPEPL1Q9HAU8 725 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 C1orf123Q9NWV4 160 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 ZNF319Q9P2F9 582 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 NUP50Q9UKX7 468 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms