RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 UBTD1Q9HAC8 227 aa20.13■□□□□ 0.81
TMEM260-202ENST00000538838 PURGQ9UJV8 347 aaKnown RBP20.13■□□□□ 0.81
TMEM260-202ENST00000538838 V9GYS6 101 aa20.13■□□□□ 0.81
TMEM260-202ENST00000538838 IGLV3-9A0A075B6K5 115 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 LOC390937A0A1W2PQ73 354 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 CD300LBA8K4G0 201 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 TIMM8AO60220 97 aaPredicted RBP20.12■□□□□ 0.81
TMEM260-202ENST00000538838 LILRA1O75019 489 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 MTRF1O75570 445 aaKnown RBP20.12■□□□□ 0.81
TMEM260-202ENST00000538838 KITLGP21583 273 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 APOBEC3AP31941 199 aaPredicted RBP20.12■□□□□ 0.81
TMEM260-202ENST00000538838 ALDH3B2P48448 385 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 TLE4Q04727 773 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 INSL4Q14641 139 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 Q6ZSR3 168 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 TMEM200AQ86VY9 491 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 TMIGD2Q96BF3 282 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 PLK3Q9H4B4 646 aa20.12■□□□□ 0.81
TMEM260-202ENST00000538838 CELSR2Q9HCU4 2923 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 A6NIN4 97 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 IGHV3-13P01766 116 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 FAHP16930 419 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 GABRA5P31644 462 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 SERPINF1P36955 418 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 MAP2K3P46734 347 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 SOX2P48431 317 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 SEMA6DQ8NFY4 1073 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 PIGLQ9Y2B2 252 aa20.11■□□□□ 0.81
TMEM260-202ENST00000538838 CENPEQ02224 2701 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 TRBV5-5A0A0J9YX44 114 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 A0A1W2PPW3 197 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 IQCF6A8MYZ5 107 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 OCM2P0CE71 109 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 SELEP16581 610 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 CD53P19397 219 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 OR13F1Q8NGS4 319 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 MARVELD3Q96A59 401 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 OR14A2Q96R54 314 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 PLEKHA1Q9HB21 404 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 DHDHQ9UQ10 334 aa20.1■□□□□ 0.81
TMEM260-202ENST00000538838 VSTM5A8MXK1 200 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 CD36P16671 472 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 TTKP33981 857 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 SELENOVP59797 346 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 ZNF787Q6DD87 383 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 MS4A15Q8N5U1 240 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 C14orf79Q96F83 325 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 ZNF12P17014 697 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 FABP5Q01469 135 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 Q499Y3 187 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 FBXL14Q8N1E6 418 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 MUC15Q8N387 334 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 CCDC54Q8NEL0 328 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 GTF3AQ92664 365 aaKnown RBP20.09■□□□□ 0.81
TMEM260-202ENST00000538838 YIPF6Q96EC8 236 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 ADAT3Q96EY9 351 aaPredicted RBP20.09■□□□□ 0.81
TMEM260-202ENST00000538838 ZNF275Q9NSD4 429 aaPredicted RBP20.09■□□□□ 0.81
TMEM260-202ENST00000538838 TAAR3PQ9P1P4 343 aa20.09■□□□□ 0.81
TMEM260-202ENST00000538838 RPL5P46777 297 aaKnown RBP20.08■□□□□ 0.8
TMEM260-202ENST00000538838 RIPPLY1Q0D2K3 151 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 TRAM1Q15629 374 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 EFNB3Q15768 340 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 TMEM106AQ96A25 262 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 FGGYQ96C11 551 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 PPP1R3EQ9H7J1 279 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 PLEKHF2Q9H8W4 249 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 RHBDD3Q9Y3P4 386 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 FBN2P35556 2912 aa20.08■□□□□ 0.8
TMEM260-202ENST00000538838 DHRS7CA6NNS2 312 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 SC5DO75845 299 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 RGS9O75916 674 aaPredicted RBP20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ZNF20P17024 532 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 PSMA1P25786 263 aaKnown RBP20.07■□□□□ 0.8
TMEM260-202ENST00000538838 DDOSTP39656 456 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ALDH3B1P43353 468 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 NKPD1Q17RQ9 610 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 MST1LQ2TV78 715 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ACSM3Q53FZ2 586 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ZNF611Q8N823 705 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 CSNK2A3Q8NEV1 391 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ORAI1Q96D31 301 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 TRMT61AQ96FX7 289 aaKnown RBP20.07■□□□□ 0.8
TMEM260-202ENST00000538838 PAPOLGQ9BWT3 736 aaKnown RBP20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ENPP5Q9UJA9 477 aa20.07■□□□□ 0.8
TMEM260-202ENST00000538838 ZNF816-ZNF321PA0A0X1KG74 233 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 ZNF879B4DU55 563 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 GABRPO00591 440 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 SOD3P08294 240 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 GADD45AP24522 165 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 MMP15P51511 669 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 FAM27D1Q5T7N8 215 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 TMEM91Q6ZNR0 172 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 Q6ZR03 302 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 GPR141Q7Z602 305 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 OR8G5Q8NG78 346 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 DVL3Q92997 716 aaPredicted RBP20.06■□□□□ 0.8
TMEM260-202ENST00000538838 DERL3Q96Q80 235 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 MSL2Q9HCI7 577 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 FAIMQ9NVQ4 179 aa20.06■□□□□ 0.8
TMEM260-202ENST00000538838 TACC2O95359 2948 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms