RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 USP43Q70EL4 1123 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 SSX8Q7RTT4 187 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 OR5L1Q8NGL2 311 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 SGK3Q96BR1 496 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 DCUN1D5Q9BTE7 237 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 SLITRK2Q9H156 845 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 NGBQ9NPG2 151 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 NAV3Q8IVL0 2385 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 A0A1W2PPW3 197 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 GGT3PA6NGU5 568 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 A6NIN4 97 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 ZNF701M0R085 212 aaPredicted RBP12.19□□□□□ -0.46
CD4-208ENST00000538827 CASKO14936 926 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 DHRS3O75911 302 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 CDRT1O95170 752 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 IGLV3-1P01715 115 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 UCHL1P09936 223 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 ZNF35P13682 527 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
CD4-208ENST00000538827 CD40P25942 277 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
CD4-208ENST00000538827 TFF3Q07654 80 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 HLXQ14774 488 aaPredicted RBP12.19□□□□□ -0.46
CD4-208ENST00000538827 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 PGAP1Q75T13 922 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 SEMA6DQ8NFY4 1073 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 FGGYQ96C11 551 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 TCF7L1Q9HCS4 588 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
CD4-208ENST00000538827 TBCCD1Q9NVR7 557 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 SPEF1Q9Y4P9 236 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 V9GYS6 101 aa12.19□□□□□ -0.46
CD4-208ENST00000538827 TRBV5-7A0A0A0MS05 114 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 J3QW42 95 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 ABCD4O14678 606 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 PIN1P1O15428 100 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 SC5DO75845 299 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 EPXP11678 715 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 FAHP16930 419 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 PCSK6P29122 969 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 MAP2K3P46734 347 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 UCP2P55851 309 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 PPP3R1P63098 170 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 BSPH1Q075Z2 132 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 GK2Q14410 553 aaPredicted RBP12.18□□□□□ -0.46
CD4-208ENST00000538827 CNPY1Q3B7I2 92 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 VHLLQ6RSH7 139 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 UNQ9370/PRO34162Q6UXP9 181 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 CCDC54Q8NEL0 328 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 OR56B2PQ8NGI1 322 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 ADAT3Q96EY9 351 aaPredicted RBP12.18□□□□□ -0.46
CD4-208ENST00000538827 OR2J1Q9GZK6 312 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 OPA3Q9H6K4 179 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 ZNF275Q9NSD4 429 aaPredicted RBP12.18□□□□□ -0.46
CD4-208ENST00000538827 SNTG1Q9NSN8 517 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 CKLFQ9UBR5 152 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 PIGLQ9Y2B2 252 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
CD4-208ENST00000538827 FBN3Q75N90 2809 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 DPRXA6NFQ7 191 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 ANKRD61A6NGH8 418 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 CLEC2LP0C7M8 214 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 OCMP0CE72 109 aaPredicted RBP12.17□□□□□ -0.46
CD4-208ENST00000538827 PTAFRP25105 342 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 SDC2P34741 201 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 THBS4P35443 961 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 RAD52P43351 418 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 MTNR1BP49286 362 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 GSK3AP49840 483 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 FAM3AP98173 230 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 CEP78Q5JTW2 689 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 RGS7BPQ6MZT1 257 aaPredicted RBP12.17□□□□□ -0.46
CD4-208ENST00000538827 ADAM5Q6NVV9 412 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 OR13C9Q8NGT0 318 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 PHYHIPQ92561 330 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 SPSB4Q96A44 273 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 PPIL3Q9H2H8 161 aaKnown RBP12.17□□□□□ -0.46
CD4-208ENST00000538827 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
CD4-208ENST00000538827 POU2F3Q9UKI9 436 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
CD4-208ENST00000538827 TRAV8-7A0A075B6U6 113 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 LOC390937A0A1W2PQ73 354 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms