RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 OR56B2PQ8NGI1 322 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 FANK1Q8TC84 345 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 H1FXQ92522 213 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 MAP6Q96JE9 813 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 C14orf119Q9NWQ9 140 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 N6AMT1Q9Y5N5 214 aa11.47□□□□□ -0.57
SMARCA4-206ENST00000538456 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 CXCR6O00574 342 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 GSTA4O15217 222 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 SELLP14151 372 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 EFNB2P52799 333 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 LOXL3P58215 753 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.577e-7■■■□□ 18.1
SMARCA4-206ENST00000538456 SEC23BQ15437 767 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 MAPRE2Q15555 327 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 LY6EQ16553 131 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 CBLL1Q75N03 491 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 WDR86Q86TI4 376 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 Q8N7P7 452 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 SPERTQ8NA61 448 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 OR4C13Q8NGP0 309 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 OR8S1Q8NH09 359 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 SGCDQ92629 289 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 PPP1R14AQ96A00 147 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 SIKE1Q9BRV8 207 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 FGFR1OP2Q9NVK5 253 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 CMTM6Q9NX76 183 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 ENPP4Q9Y6X5 453 aa11.46□□□□□ -0.57
SMARCA4-206ENST00000538456 DNAH3Q8TD57 4116 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 A0A1W2PRQ8 180 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 ACOT8O14734 319 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 NDUFB3O43676 98 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 VSIG10L2P0DP72 767 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC2A1P11166 492 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 NOS3P29474 1203 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 GMFBP60983 142 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 CSNK2BP67870 215 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 LIPEQ05469 1076 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 DGCR6Q14129 220 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 NSUN5P1Q3KNT7 163 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC36A1Q7Z2H8 476 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 OR52J3Q8NH60 311 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 C17orf50Q8WW18 174 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 CFHR4Q92496 578 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 RCN3Q96D15 328 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 IFT27Q9BW83 186 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 FAM107BQ9H098 131 aa11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 KRCC1Q9NPI7 259 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 MRPL22Q9NWU5 206 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 PRPF19Q9UMS4 504 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-206ENST00000538456 OR6C68A6NDL8 312 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 DIRAS1O95057 198 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 TFF1P04155 84 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 ZNF823P16415 610 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 GRK5P34947 590 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 PRKXP51817 358 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 DPY19L4Q7Z388 723 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 PIGWQ7Z7B1 504 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 OR5T2Q8NGG2 359 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 RORBQ92753 470 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 TNFRSF14Q92956 283 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 FAM162AQ96A26 154 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 CLPTM1LQ96KA5 538 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 SSX3Q99909 188 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 COPS4Q9BT78 406 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 DCTN5Q9BTE1 182 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 OR52D1Q9H346 318 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 SAR1AQ9NR31 198 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-206ENST00000538456 TVP23AA6NH52 213 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 ANKRD30BLA7E2S9 258 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 SNX3O60493 162 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 PSKH1P11801 424 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 NCK1P16333 377 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 PAX6P26367 422 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC6A6P31641 620 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 PYCR1P32322 319 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 UBE2E1P51965 193 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 SLC35F1Q5T1Q4 408 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 CGB2Q6NT52 195 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 C11orf88Q6PI97 169 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 LYPD4Q6UWN0 246 aa11.43□□□□□ -0.58
SMARCA4-206ENST00000538456 DRAM2Q6UX65 266 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms