RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 OR5AC2Q9NZP5 309 aa10.78□□□□□ -0.68
CPSF7-218ENST00000537641 KLHL13Q9P2N7 655 aa10.78□□□□□ -0.68
CPSF7-218ENST00000537641 ASH2LQ9UBL3 628 aa10.78□□□□□ -0.68
CPSF7-218ENST00000537641 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
CPSF7-218ENST00000537641 PCDH15Q96QU1 1955 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 A0A0A6YYD4 124 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 MEX3AA1L020 520 aaKnown RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 C17orf51A8MQB3 221 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 RNASEK-C17orf49H0YIS7 233 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 KCNAB3O43448 404 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 FARS2O95363 451 aaKnown RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 WISP1O95388 367 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 CD5P06127 495 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 SMIM6P0DI80 62 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 IL15RAQ13261 267 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 SLC9A3R2Q15599 337 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 BTNL8Q6UX41 500 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 H1FNTQ75WM6 255 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 COX15Q7KZN9 410 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 TMEM200AQ86VY9 491 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 DEFB119Q8N690 84 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 OR56B1Q8NGI3 324 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 C11orf40Q8WZ69 217 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 TGM7Q96PF1 710 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 CMSS1Q9BQ75 279 aaKnown RBP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 NICN1Q9BSH3 213 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 SLC7A5P2Q9GIP4 190 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 NRSN2Q9GZP1 204 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 CHST11Q9NPF2 352 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 FANCFQ9NPI8 374 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPSF7-218ENST00000537641 CUTCQ9NTM9 273 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 COPS7AQ9UBW8 275 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 OSGIN2Q9Y236 505 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 FREM3P0C091 2139 aa10.77□□□□□ -0.69
CPSF7-218ENST00000537641 IGHV5-51A0A0C4DH38 117 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ANKUB1A6NFN9 424 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 COLCA2A8K830 154 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 LMO7DNF2Z398 122 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 CDC14BO60729 498 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 MED6O75586 246 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ADAP1O75689 374 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 GAPDHP04406 335 aaKnown RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 S100A8P05109 93 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 SFTA3P0C7M3 94 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 IL11P20809 199 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ADH6P28332 368 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ECI1P42126 302 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 GFERP55789 205 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 SUMO3P55854 103 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.691e-8■■□□□ 12.8
CPSF7-218ENST00000537641 RAB32Q13637 225 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ANKRD55Q3KP44 614 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 PTCRAQ6ISU1 281 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 OGFOD3Q6PK18 319 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 GLIPR1L1Q6UWM5 242 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 WNT2BQ93097 391 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 ZDHHC12Q96GR4 267 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 C1orf147Q96MC9 270 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 URM1Q9BTM9 101 aaKnown RBP10.76□□□□□ -0.69
CPSF7-218ENST00000537641 TMEM59Q9BXS4 323 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 FOXQ1Q9C009 403 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 CA14Q9ULX7 337 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 FAM96BQ9Y3D0 163 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 KPTNQ9Y664 436 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 GON4LQ3T8J9 2241 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 DNAH14Q0VDD8 3507 aa10.76□□□□□ -0.69
CPSF7-218ENST00000537641 IGKV1D-43A0A0B4J1Z2 117 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 A0A1W2PNV4 684 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 CDC14CA4D256 554 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 MPIG6BO95866 241 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 CST4P01036 141 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 AMY2BP19961 511 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 PTAFRP25105 342 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 KCNJ3P48549 501 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 NPY4RP50391 375 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 DVL1P1P54792 670 aaPredicted RBP10.75□□□□□ -0.69
CPSF7-218ENST00000537641 F2RL1P55085 397 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 TAS2R46P59540 309 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 HSF1Q00613 529 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 SWI5Q1ZZU3 235 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 RNF212Q495C1 297 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 C14orf28Q4W4Y0 310 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 PLAC9Q5JTB6 97 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 TMEM268Q5VZI3 342 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 OR5AS1Q8N127 324 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 OR1N1Q8NGS0 311 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 OR2I1PQ8NGU4 316 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 ROBO4Q8WZ75 1007 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 EMG1Q92979 244 aaKnown RBP10.75□□□□□ -0.69
CPSF7-218ENST00000537641 TMEM41AQ96HV5 264 aa10.75□□□□□ -0.69
CPSF7-218ENST00000537641 RTBDNQ9BSG5 229 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms