RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DMRTC1Q5HYR2 192 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 LCN10Q6JVE6 187 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 GUSBP11Q6P575 273 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 NAA40Q86UY6 237 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 ELP5Q8TE02 316 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 ZC3H10Q96K80 434 aaKnown RBP12.65□□□□□ -0.38
USP44-203ENST00000537435 GPER1Q99527 375 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 SPSB2Q99619 263 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 CHMP1AQ9HD42 196 aaPredicted RBP12.65□□□□□ -0.38
USP44-203ENST00000537435 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
USP44-203ENST00000537435 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 NAT1P18440 290 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 PSMB6P28072 239 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
USP44-203ENST00000537435 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 CSAG2Q9Y5P2 127 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 CRTAPO75718 401 aaPredicted RBP12.64□□□□□ -0.39
USP44-203ENST00000537435 GP1BAP07359 652 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 PGAM2P15259 253 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 CCL1P22362 96 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 ZNF385CQ66K41 422 aaPredicted RBP12.64□□□□□ -0.39
USP44-203ENST00000537435 DOK3Q7L591 496 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 TMEM17Q86X19 198 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 ARMC10Q8N2F6 343 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 OR4K17Q8NGC6 315 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 OR52H1Q8NGJ2 320 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
USP44-203ENST00000537435 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
USP44-203ENST00000537435 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 NPY4RP50391 375 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 PRAMEF20Q5VT98 475 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 TMEM185AQ8NFB2 350 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 BPIFCQ8NFQ6 507 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
USP44-203ENST00000537435 C5orf66Q9H5L9 145 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 ADAMTS9Q9P2N4 1935 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 C5orf63A6NC05 138 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 E9PLN8 166 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 CCL7P80098 99 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 KCNMB1Q16558 191 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 ACTBL2Q562R1 376 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 ARRDC1Q8N5I2 433 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
USP44-203ENST00000537435 OR56B1Q8NGI3 324 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 DEFB126Q9BYW3 111 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 NMES1Q9C002 83 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
USP44-203ENST00000537435 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 MFNGO00587 321 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 CLDN17P56750 224 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 GRB2P62993 217 aaKnown RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 DEFA5Q01523 94 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 ARFRP1Q13795 201 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 SLC9A3R2Q15599 337 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 SGCAQ16586 387 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 PNLIPRP3Q17RR3 467 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 TMPPEQ6ZT21 453 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 OR5AP2Q8NGF4 316 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 OR5D18Q8NGL1 313 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 SLC25A43Q8WUT9 341 aaPredicted RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 LRRC46Q96FV0 321 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 URM1Q9BTM9 101 aaKnown RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 AKIRIN1Q9H9L7 192 aaPredicted RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 HDGFL3Q9Y3E1 203 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 IGHV5-10-1A0A0J9YXX1 117 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 PI3P19957 117 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 ARHGDIBP52566 201 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 MC2RQ01718 297 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 CLEC18BQ6UXF7 455 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 FADS6Q8N9I5 356 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 OR1S2Q8NGQ3 325 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 OR5H2Q8NGV7 314 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 SSC4DQ8WTU2 575 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 NARS2Q96I59 477 aaKnown RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 MICU1Q9BPX6 476 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 OCSTAMPQ9BR26 566 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 ZNF416Q9BWM5 594 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 PRR13Q9NZ81 148 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 C19orf25Q9UFG5 118 aaPredicted RBP12.62□□□□□ -0.39
USP44-203ENST00000537435 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
USP44-203ENST00000537435 MED12Q93074 2177 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms