RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OIT3Q8WWZ8 545 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 C14orf144Q96I85 54 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OR10A2Q9H208 303 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PRR13Q9NZ81 148 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 AMDHD2Q9Y303 409 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 CCDC187A0A096LP49 1063 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SHISA3A0PJX4 238 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 H3BML4 177 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PNLIPRP2P54317 469 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TLE1Q04724 770 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SLC10A1Q14973 349 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 DCAF12L2Q5VW00 463 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM268Q5VZI3 342 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 WBP2NLQ6ICG8 309 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FIGLAQ6QHK4 219 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 C17orf78Q8N4C9 275 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FIBINQ8TAL6 211 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GPX8Q8TED1 209 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MRGPRX3Q96LB0 322 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 NUDT22Q9BRQ3 303 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 LYRM2Q9NU23 88 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OR52A1Q9UKL2 312 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 RCL1Q9Y2P8 373 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MYLKQ15746 1914 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 LOC107986453A0A1B0GWG9 222 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KCNAB3O43448 404 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF93P35789 620 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TSPAN7P41732 249 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 DIO1P49895 249 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FABP6P51161 128 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 HNRNPA3P51991 378 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 RPL7L1Q6DKI1 246 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PARS2Q7L3T8 475 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SLC24A4Q8NFF2 622 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 CORO2AQ92828 525 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 HINT2Q9BX68 163 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SGPP1Q9BX95 441 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ACTR3CQ9C0K3 210 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PTGES2Q9H7Z7 377 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM30AQ9NV96 361 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM242Q9NWH2 141 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OR5V1Q9UGF6 321 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SLC22A13Q9Y226 551 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TDRD15B5MCY1 1934 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PRAMEF25A6NGN4 478 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 H3BNC9 293 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ADRA2AP08913 450 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OR8U8P0C7N1 319 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PSMB3P49720 205 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 CASP6P55212 293 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 NPSR1Q6W5P4 371 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PPP1R3BQ86XI6 285 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 EDARADDQ8WWZ3 215 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MR1Q95460 341 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 DTD2Q96FN9 168 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 Q96M85 177 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 VAMP8Q9BV40 100 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GPR87Q9BY21 358 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 RAB33BQ9H082 229 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF286AQ9HBT8 521 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 DENND4AQ7Z401 1863 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 A0A0A6YYC8 382 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NPIPA2E9PIF3 369 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NPIPA3F8WFD2 350 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 I3L1I5 382 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 GEMIN2O14893 280 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 NDUFS6O75380 124 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 KLK3P07288 261 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DPP4P27487 766 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 UBE2V2Q15819 145 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF787Q6DD87 383 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR2L13Q8N349 312 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF611Q8N823 705 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR51A2Q8NGJ7 313 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 OR51F2Q8NH61 342 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM37Q8WXS4 190 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 HLA-CQ95604 372 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TSSK2Q96PF2 358 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 KLF16Q9BXK1 252 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 GAL3ST2Q9H3Q3 398 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CACFD1Q9UGQ2 172 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 CST2P09228 141 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TIMP2P16035 220 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 TBXA2RP21731 343 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 PPICP45877 212 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 RAE1P78406 368 aaKnown RBP4.86□□□□□ -1.63
PTPRD-213ENST00000537002 RAB32Q13637 225 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DOC2BQ14184 412 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 C2orf27AQ580R0 203 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF66Q6ZN08 573 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 MARCH3Q86UD3 253 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 DDIT4LQ96D03 193 aa4.86□□□□□ -1.63
PTPRD-213ENST00000537002 LMF2Q9BU23 707 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms