RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ULBP1Q9BZM6 244 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 OR8D2Q9GZM6 311 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RAB33BQ9H082 229 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RAB6CQ9H0N0 254 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RGCCQ9H4X1 137 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CLMPQ9H6B4 373 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TMEM38AQ9H6F2 299 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RNF167Q9H6Y7 350 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CWH43Q9H720 699 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NMRAL1Q9HBL8 299 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ADGRL4Q9HBW9 690 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FGF22Q9HCT0 170 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ACKR4Q9NPB9 350 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 EXOSC4Q9NPD3 245 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 UBE2TQ9NPD8 197 aaPredicted RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 B3GAT2Q9NPZ5 323 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TMEM100Q9NV29 134 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NDUFB11Q9NX14 153 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 MARCH5Q9NX47 278 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 P4HTMQ9NXG6 502 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 BARHL2Q9NY43 387 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PIPOXQ9P0Z9 390 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 RHCGQ9UBD6 479 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CHRNA9Q9UGM1 479 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 CD84Q9UIB8 345 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 ZNF346Q9UL40 294 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 CLEC4EQ9ULY5 219 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 EXO1Q9UQ84 846 aaKnown RBP2.17□□□□□ -2.06
SKA3-207ENST00000536239 AMDHD2Q9Y303 409 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FAM96BQ9Y3D0 163 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 FLT4P35916 1363 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 GBF1Q92538 1859 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 TRIP11Q15643 1979 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NUP188Q5SRE5 1749 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 SHANK3Q9BYB0 1731 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 NHSL1Q5SYE7 1610 aa2.17□□□□□ -2.06
SKA3-207ENST00000536239 PDCD11Q14690 1871 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 RGPD3A6NKT7 1758 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 MAST2Q6P0Q8 1798 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RGPD4Q7Z3J3 1758 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 LOC105371242A0A075B767 164 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 A0A087WWC5 75 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 A0A087WZY1 265 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 IGHV2-70DA0A0C4DH43 119 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 KIR2DL5BA0A0G2JN68 375 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 KIR2DL5BA0A0G2JPC4 375 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 A0A1W2PRV1 198 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ANKRD20A5PA0PJZ0 165 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 C7orf77A4D0Y5 90 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RNF222A6NCQ9 220 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 GGT3PA6NGU5 568 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HSPB2A8KAH6 182 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 A8MVM7 634 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR11H12B2RN74 326 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 B9A039 149 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 PPP5D1E7EU14 171 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FAM86B1E9PN63 330 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 F5H5P2 479 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RNASEK-C17orf49H0YIS7 233 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TRAPPC2LH3BP13 241 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 KLRC4-KLRK1H3BQV0 150 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FXYD1O00168 92 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CXCR6O00574 342 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ACKR2O00590 384 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 PRRG1O14668 218 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MAGEB4O15481 346 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 BCL2L11O43521 198 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CREBL2O60519 120 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 ECI2O75521 394 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 EEDO75530 441 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 ERAL1O75616 437 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 REM1O75628 298 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ADAP1O75689 374 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 STK16O75716 305 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC25A12O75746 678 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MMP23AO75900 390 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SNAI1O95863 264 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 SCGB1D1O95968 90 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HPRT1P00492 218 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 APOC2P02655 101 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 C1QCP02747 245 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 VTNP04004 478 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RLN1P04808 185 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CD5P06127 495 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CSF1P09603 554 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ALPIP09923 528 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR10J4P0C629 311 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ALPPL2P10696 532 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 BCKDHAP12694 445 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FABP4P15090 132 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MYOD1P15172 320 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FOLR1P15328 257 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 NCK1P16333 377 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CD58P19256 250 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CSNK2A2P19784 350 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 GZMHP20718 246 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 IDSP22304 550 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TUBG1P23258 451 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ZBTB25P24278 435 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HRH2P25021 359 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms