RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CASTOR1Q8WTX7 329 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 NAT6Q93015 286 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 PHB2Q99623 299 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 SLC6A15Q9H2J7 730 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 MED9Q9NWA0 146 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 KCNMB2Q9Y691 235 aa11.62□□□□□ -0.55
LDLR-203ENST00000535915 A0A0A6YYD4 124 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 TEX46H3BTG2 121 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 RLN2P04090 185 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 ZNF17P17021 662 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
LDLR-203ENST00000535915 KCNMB1Q16558 191 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 DMRTC1Q5HYR2 192 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 DOK3Q7L591 496 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 OR2W3Q7Z3T1 314 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
LDLR-203ENST00000535915 OR5M9Q8NGP3 310 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 OR2I1PQ8NGU4 316 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 OR4K15Q8NH41 348 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 KCNG3Q8TAE7 436 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 IFI44Q8TCB0 444 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 RAB3CQ96E17 227 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 NUDT16L1Q9BRJ7 211 aaKnown RBP11.61□□□□□ -0.55
LDLR-203ENST00000535915 TMEM59Q9BXS4 323 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 SHARPINQ9H0F6 387 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 A0A0D9SG52 128 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 SOCS1O15524 211 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 CDC14BO60729 498 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 FGF5P12034 268 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 ZNF239Q16600 458 aaKnown RBP11.61□□□□□ -0.55
LDLR-203ENST00000535915 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 PPP1R1CQ8WVI7 109 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 GAREM1Q9H706 876 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 WDR54Q9H977 334 aa11.61□□□□□ -0.55
LDLR-203ENST00000535915 LOC102725191A0A1B0GVB3 256 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 A0A1W2PP11 408 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 CRTAPO75718 401 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 MGMTP16455 207 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 TBPP20226 339 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 AVPR2P30518 371 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 AKR1D1P51857 326 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 SRSF4Q08170 494 aaKnown RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 PLAC9Q5JTB6 97 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 MITD1Q8WV92 249 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 MR1Q95460 341 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 PGAM5Q96HS1 289 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 C1orf147Q96MC9 270 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 GNRHR2Q96P88 292 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 NXT1Q9UKK6 140 aaKnown RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 PTRH2Q9Y3E5 179 aaKnown RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 IGHV1-45A0A0A0MS14 117 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 IGHV3-15A0A0B4J1V0 119 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 KANTRA0A1W2PQU2 76 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 WDPCPO95876 746 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 IL2RAP01589 272 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 CFIP05156 583 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 KLK3P07288 261 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 CYC1P08574 325 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 CSNK1A1P48729 337 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 ATP1B3P54709 279 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 IL11RAQ14626 422 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 OPN5Q6U736 354 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 NAA40Q86UY6 237 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 GTPBP8Q8N3Z3 284 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 MARCH1Q8TCQ1 289 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 JSRP1Q96MG2 331 aaPredicted RBP11.6□□□□□ -0.55
LDLR-203ENST00000535915 DMRTA2Q96SC8 542 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 PILRBQ9UKJ0 227 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
LDLR-203ENST00000535915 E9PLN8 166 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 G3V3Y1 287 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 GSTP1P09211 210 aaKnown RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 UBBP0CG47 229 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 NR2C1P13056 603 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 HIST1H1DP16402 221 aaKnown RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 CCL1P22362 96 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 SLC6A9P48067 706 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 IGSF11Q5DX21 431 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 BEX5Q5H9J7 111 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 PMS2CLQ68D20 193 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 LURAP1LQ8IV03 231 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 RELL2Q8NC24 303 aaPredicted RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 A0A087WZY1 265 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 LOC102723996A0A087X1L8 192 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 F5H5K5 113 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 EFSO43281 561 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 CCL3P10147 92 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 MSR1P21757 451 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 MICBQ29980 383 aa11.59□□□□□ -0.55
LDLR-203ENST00000535915 FAHD2BQ6P2I3 314 aaPredicted RBP11.59□□□□□ -0.55
LDLR-203ENST00000535915 TFAP2EQ6VUC0 442 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms