RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SLC25A1P53007 311 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 PSME3P61289 254 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 ACSM1Q08AH1 577 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 KRT72Q14CN4 511 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 OR8B8Q15620 311 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 MICBQ29980 383 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 FBLN7Q53RD9 439 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 LINC00346Q8IVM7 164 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 ZDHHC21Q8IVQ6 265 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 OR52H1Q8NGJ2 320 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 OR10Z1Q8NGY1 313 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM162AQ96A26 154 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 RERGLQ9H628 205 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 SP140LQ9H930 580 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 VPREB3Q9UKI3 123 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 CDH10Q9Y6N8 788 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 COMMD3-BMI1R4GMX3 469 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 A0A0U1RQK1 487 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 M0R1W7 72 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 APOC1P02654 83 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 FBP1P09467 338 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF823P16415 610 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 AMY2BP19961 511 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 ANOS1P23352 680 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 MAGEA2P43356 314 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC15A1P46059 708 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 GRB2P62993 217 aaKnown RBP9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 FAM3AP98173 230 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 GLYATL3Q5SZD4 288 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 RUSC1-AS1Q66K80 236 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 PGBD2Q6P3X8 592 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 CRIP3Q6Q6R5 217 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 WDR82Q6UXN9 313 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 RASSF6Q6ZTQ3 369 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC36A1Q7Z2H8 476 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 WDR86Q86TI4 376 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 Q8N7P7 452 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 DTX3Q8N9I9 347 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 RNF133Q8WVZ7 376 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 CFHR4Q92496 578 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 TECTBQ96PL2 329 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 CCT8L2Q96SF2 557 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 DCTN5Q9BTE1 182 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 IFT27Q9BW83 186 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 ABCB9Q9NP78 766 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 C1orf123Q9NWV4 160 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 MAGEL2Q9UJ55 1249 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF391Q9UJN7 358 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 BAIAP2Q9UQB8 552 aa9.21□□□□□ -0.94
CLSTN3-206ENST00000535668 TENM3Q9P273 2699 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 IGHV3-64DA0A0J9YX35 117 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 hCG_38984A0A1B0GV85 526 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 GGT3PA6NGU5 568 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF878C9JN71 531 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 C3orf80F5H4A9 247 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 OR10H3O60404 316 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 PSKH1P11801 424 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 NCK1P16333 377 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 NAA10P41227 235 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 KIR2DS4P43632 304 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 UBE2E1P51965 193 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 CAV3P56539 151 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 ARF6P62330 175 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 GK3PQ14409 553 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 C2orf68Q2NKX9 166 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 LINC01590Q5TEZ4 76 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 STUMQ69YW2 141 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 SFRP4Q6FHJ7 346 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 CD300LDQ6UXZ3 194 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF788Q6ZQV5 615 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 CMTM4Q8IZR5 234 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 BEND2Q8NDZ0 799 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 CSNK2A3Q8NEV1 391 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 OR1M1Q8NGA1 313 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 OR56B2PQ8NGI1 322 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 OR52J3Q8NH60 311 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 GNPDA2Q8TDQ7 276 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNRF4Q8WWF5 429 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 SGK3Q96BR1 496 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 MEGF9Q9H1U4 602 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 MMADHCQ9H3L0 296 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 MPC1Q9Y5U8 109 aa9.2□□□□□ -0.94
CLSTN3-206ENST00000535668 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 TMEM210A6NLX4 147 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 DIRAS1O95057 198 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 CST4P01036 141 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 GYPAP02724 150 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 FMO3P31513 532 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 DCTDP32321 178 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 ENTPD1P49961 510 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 NUDT2P50583 147 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 GYS2P54840 703 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 MXRA7P84157 204 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 KLHL12Q53G59 568 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 NCR3LG1Q68D85 454 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF826PQ6ZT77 177 aa9.19□□□□□ -0.94
CLSTN3-206ENST00000535668 SLC16A9Q7RTY1 509 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms