RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 POM121L2Q96KW2 1035 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 RYDENQ9NUL5 291 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ARRDC5A6NEK1 342 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 FAM90A27PA6NNH2 459 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 NUDT19A8MXV4 375 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 SNCGO76070 127 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 CA5BP1Q8WTZ4 195 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 TMEM30AQ9NV96 361 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 WNT16Q9UBV4 365 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ASAH1Q13510 395 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ENDOGQ14249 297 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 IL11RAQ14626 422 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 MARCH1Q8TCQ1 289 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF391Q9UJN7 358 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 OR2C1O95371 312 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZBTB25P24278 435 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ABCD3P28288 659 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 EXOSC2Q13868 293 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF83P51522 516 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 RNPS1Q15287 305 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 ANKRD34AQ69YU3 496 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 NECAP1Q8NC96 275 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 OR2G2Q8NGZ5 317 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 RPUSD4Q96CM3 377 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 BOLA1Q9Y3E2 137 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 GON4LQ3T8J9 2241 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 UMAD1C9J7I0 102 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF416Q9BWM5 594 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 MAGT1Q9H0U3 335 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 CD3DP04234 171 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 ACY3Q96HD9 319 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 FBP1P09467 338 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 FAAP20Q6NZ36 180 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 CHST6Q9GZX3 395 aa16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 GAR1Q9NY12 217 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-203ENST00000535236 HPP00738 406 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 NTF3P20783 257 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 MICBQ29980 383 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 CXorf67Q86X51 503 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 RTN4IP1Q8WWV3 396 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 FZD6O60353 706 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 TXNDC12O95881 172 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 SLC38A6Q8IZM9 456 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 TMED6Q8WW62 240 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 RNF24Q9Y225 148 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 A0A0B4J203 849 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 SHISA8B8ZZ34 492 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ATP6V1G2-DDX39BF2Z307 99 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 CLEC18AA5D8T8 446 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF354AO60765 605 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 FABP5Q01469 135 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ADAM5Q6NVV9 412 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 Q8IYB0 196 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 CLEC18CQ8NCF0 446 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ADPRHL1Q8NDY3 354 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 C2orf50Q96LR7 162 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 OR51I2Q9H344 312 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ALG1L2C9J202 215 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 PDGFAP04085 211 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 OR4E1P0C645 316 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 FGF7P21781 194 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 PXDC1Q5TGL8 231 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 ANKRD53Q8N9V6 530 aa16.35■□□□□ 0.21
SFSWAP-203ENST00000535236 SRP14P37108 136 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 LYPD8Q6UX82 237 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 OR10Z1Q8NGY1 313 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 PP6455Q8WZ26 134 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 C19orf43Q9BQ61 176 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 MRPL22Q9NWU5 206 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 PPIHO43447 177 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 RRASP10301 218 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 UBE2MP61081 183 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 ABI3BPQ7Z7G0 1075 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 CHRDL1Q9BU40 450 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 CTDSP1Q9GZU7 261 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 AQP8O94778 261 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 SLC25A4P12235 298 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 PNLIPRP3Q17RR3 467 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 Q56UQ5 140 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 OR13D1Q8NGV5 346 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 KTI12Q96EK9 354 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 ISG20L2Q9H9L3 353 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 TMEM211Q6ICI0 200 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 DTWD2Q8NBA8 298 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 OR10V1Q8NGI7 309 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 FAM103A1Q9BTL3 118 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 SPNS1Q9H2V7 528 aa16.34■□□□□ 0.21
SFSWAP-203ENST00000535236 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 LRRC3CA6NJW4 275 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 DCTN6O00399 190 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 S100A4P26447 101 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms